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r-metaplus
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public |
Performs meta-analysis and meta-regression using standard and robust methods with confidence intervals based on the profile likelihood. Robust methods are based on alternative distributions for the random effect, either the t-distribution (Lee and Thompson, 2008 <doi:10.1002/sim.2897> or Baker and Jackson, 2008 <doi:10.1007/s10729-007-9041-8>) or mixtures of normals (Beath, 2014 <doi:10.1002/jrsm.1114>).
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2025-10-07 |
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r-wto
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public |
Computes the Weighted Topological Overlap with positive and negative signs (wTO) networks given a data frame containing the mRNA count/ expression/ abundance per sample, and a vector containing the interested nodes of interaction (a subset of the elements of the full data frame). It also computes the cut-off threshold or p-value based on the individuals bootstrap or the values reshuffle per individual. It also allows the construction of a consensus network, based on multiple wTO networks. The package includes a visualization tool for the networks. More about the methodology can be found at <arXiv:1711.04702>.
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2025-10-07 |
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pertpy
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public |
Perturbation Analysis in the scverse ecosystem.
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2025-10-07 |
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mpi4jax
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public |
MPI support for JAX
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2025-10-07 |
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r-runonce
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public |
Package 'runonce' helps automating the saving of long-running code to help running the same code multiple times. If you run some long-running code once, it saves the result in a file on disk. Then, if the result already exists, i.e. if the code has already been run and its output has already been saved, it just reads the result from the stored file instead of running the code again.
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2025-10-07 |
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google-cloud-sdk
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public |
Command-line interface for Google Cloud Platform products and services
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2025-10-07 |
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stsynphot
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public |
Synthetic photometry for HST/JWST
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2025-10-07 |
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pcst-fast
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public |
A fast implementation of the Goemans-Williamson scheme for the PCST (prize-collecting Steiner tree/forest) problem.
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2025-10-07 |
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dbus-fast
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public |
A faster version of dbus-next
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2025-10-07 |
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deid
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public |
best effort anonymization for dicom images with Python
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2025-10-07 |
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ark
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public |
Ark, an R kernel
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2025-10-07 |
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pyfive
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public |
A pure Python HDF5 file reader
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2025-10-07 |
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ansys-tools-visualization-interface
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public |
A Python visualization interface for PyAnsys libraries
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2025-10-07 |
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smqtk-classifier
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public |
Algorithms, data structures and utilities around performing classification of inputs.
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2025-10-07 |
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pydantic-partial
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public |
Create partial models from your pydantic models. Partial models may allow None for certain or all fields.
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2025-10-07 |
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pytsql
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public |
pytsql allows to run mssql scripts, typically run via GUIs, via CLI.
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2025-10-07 |
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snowmeta
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public |
Snowmeta: a metadata-driven ingestion framework for Snowflake.
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2025-10-07 |
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bioimageio.core
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public |
Python functionality for the bioimage model zoo
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2025-10-07 |
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types-aioboto3
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public |
Type annotations for aioboto3
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2025-10-07 |
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oso
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public |
Oso is a batteries-included framework for building authorization in your application.
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2025-10-07 |
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wgpu-py
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public |
next generation GPU API for Python
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2025-10-07 |
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oh-my-posh
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public |
Prompt theme engine for any shell
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2025-10-07 |
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stonesoup
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public |
A tracking and state estimation framework
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2025-10-07 |
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pybispectra
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public |
A Python signal processing package for computing spectral-domain and time-domain interactions using the bispectrum.
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2025-10-07 |
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premise
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public |
Coupling IAM output to ecoinvent LCA database ecoinvent for prospective LCA
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2025-10-07 |
