conda-forge / packages

Package Name Access Summary Updated
r-leafem public Provides extensions for package 'leaflet', many of which are used by package 'mapview'. Focus is on functionality readily available in Geographic Information Systems such as 'Quantum GIS'. Includes functions to display coordinates of mouse pointer position, query image values via mouse pointer and zoom-to-layer buttons. Additionally, provides a feature type agnostic function to add points, lines, polygons to a map. 2019-07-22
r-sf public Support for simple features, a standardized way to encode spatial vector data. Binds to 'GDAL' for reading and writing data, to 'GEOS' for geometrical operations, and to 'PROJ' for projection conversions and datum transformations. 2019-07-22
keycloak-gatekeeper public An adapter for use with OpenID Connect that supports both access tokens in a browser cookie or bearer tokens 2019-07-22
r-rosm public Download and plot Open Street Map <http://www.openstreetmap.org/>, Bing Maps <http://www.bing.com/maps> and other tiled map sources. Use to create basemaps quickly and add hillshade to vector-based maps. 2019-07-22
pingouin public Pingouin is an open-source statistical package written in Python 3 and based mostly on Pandas and NumPy 2019-07-22
sos-notebook public Script of Scripts (SoS): an interactive, cross-platform, and cross-language workflow system for reproducible data analysis 2019-07-22
libbrial public Brial - successor to PolyBoRi 2019-07-22
brial public Brial - successor to PolyBoRi 2019-07-22
jaxlib public Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more 2019-07-22
gdal public GDAL is a translator library for raster and vector geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. 2019-07-22
libgdal public The Geospatial Data Abstraction Library (GDAL) 2019-07-22
botocore public Low-level, data-driven core of boto 3. 2019-07-22
voila public Rendering of live Jupyter notebooks with interactive widgets 2019-07-22
scikit-image public Image processing routines for SciPy. 2019-07-22
mayavi public The Mayavi scientific data 3-dimensional visualizers 2019-07-21
gtk2 public Primary library used to construct user interfaces in GNOME applications 2019-07-21
hypercorn public A ASGI Server based on Hyper libraries and inspired by Gunicorn. 2019-07-21
nexus public NeXus is a common data format for neutron, x-ray, and muon science 2019-07-21
pyfmmlib public Python wrappers for FMMLIB2D and FMMLIB3D 2019-07-21
pyparsing public Create and execute simple grammars 2019-07-21
r-adehabitatlt public A collection of tools for the analysis of animal movements. 2019-07-21
r public R is a free software environment for statistical computing and graphics. 2019-07-21
r-aggregation public Contains functionality for performing the following methods of p-value aggregation: Fisher's method [Fisher, RA (1932, ISBN: 9780028447308)], the Lancaster method (weighted Fisher's method) [Lancaster, HO (1961, <doi:10.1111/j.1467-842X.1961.tb00058.x>)], and Sidak correction [Sidak, Z (1967, <doi:10.1080/01621459.1967.10482935>)]. Please cite Yi et al., the manuscript corresponding to this package [Yi, L et al., (2017), <doi:10.1101/190199>]. 2019-07-21
ripser public A Lean Persistent Homology Library for Python 2019-07-21
persim public Distances and representations of persistence diagrams 2019-07-21
r-akima public Several cubic spline interpolation methods of H. Akima for irregular and regular gridded data are available through this package, both for the bivariate case (irregular data: ACM 761, regular data: ACM 760) and univariate case (ACM 433 and ACM 697). Linear interpolation of irregular gridded data is also covered by reusing D. J. Renkas triangulation code which is part of Akimas Fortran code. A bilinear interpolator for regular grids was also added for comparison with the bicubic interpolator on regular grids. 2019-07-21
lcalc public No Summary 2019-07-21
r-apcluster public Implements Affinity Propagation clustering introduced by Frey and Dueck (2007) <DOI 2019-07-21
r-alakazam public Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017) <doi:10.1093/bioinformatics/btv359>, Stern, Yaari and Vander Heiden, et al (2014) <doi:10.1126/scitranslmed.3008879>. 2019-07-21
r-anomalydetection public Implements procedures developed by Gutierrez et al. (2017, <https://journal.r-project.org/archive/2017/RJ-2017-039/index.html>) to aid in detecting network log anomalies. By combining various multivariate analytic approaches relevant to network anomaly detection, it provides cyber analysts efficient means to detect suspected anomalies requiring further evaluation. 2019-07-21
r-aod public This package provides a set of functions to analyse overdispersed counts or proportions. Most of the methods are already available elsewhere but are scattered in different packages. The proposed functions should be considered as complements to more sophisticated methods such as generalized estimating equations (GEE) or generalized linear mixed effect models (GLMM). 2019-07-21
r-ahocorasicktrie public Aho-Corasick is an optimal algorithm for finding many keywords in a text. It can locate all matches in a text in O(N+M) time; i.e., the time needed scales linearly with the number of keywords (N) and the size of the text (M). Compare this to the naive approach which takes O(N*M) time to loop through each pattern and scan for it in the text. This implementation builds the trie (the generic name of the data structure) and runs the search in a single function call. If you want to search multiple texts with the same trie, the function will take a list or vector of texts and return a list of matches to each text. By default, all 128 ASCII characters are allowed in both the keywords and the text. A more efficient trie is possible if the alphabet size can be reduced. For example, DNA sequences use at most 19 distinct characters and usually only 4; protein sequences use at most 26 distinct characters and usually only 20. UTF-8 (Unicode) matching is not currently supported. 2019-07-21
r-arrow public R Integration to 'Apache' 'Arrow'. 2019-07-21
r-arules public Provides the infrastructure for representing, manipulating and analyzing transaction data and patterns (frequent itemsets and association rules). Also provides C implementations of the association mining algorithms Apriori and Eclat. 2019-07-21
r-animation public Provides functions for animations in statistics, covering topics in probability theory, mathematical statistics, multivariate statistics, non-parametric statistics, sampling survey, linear models, time series, computational statistics, data mining and machine learning. These functions may be helpful in teaching statistics and data analysis. Also provided in this package are a series of functions to save animations to various formats, e.g. Flash, 'GIF', HTML pages, 'PDF' and videos. 'PDF' animations can be inserted into 'Sweave' / 'knitr' easily. SWF files generation not supported with this distribution 2019-07-21
r-assotester public R package with statistical tests and methods for genetic association studies with emphasis on rare variants and binary (dichotomous) traits 2019-07-21
r-apatables public A common task faced by researchers is the creation of APA style (i.e., American Psychological Association style) tables from statistical output. In R a large number of function calls are often needed to obtain all of the desired information for a single APA style table. As well, the process of manually creating APA style tables in a word processor is prone to transcription errors. This package creates Word files (.doc files) containing APA style tables for several types of analyses. Using this package minimizes transcription errors and reduces the number commands needed by the user. 2019-07-21
r-ashr public The R package 'ashr' implements an Empirical Bayes approach for large-scale hypothesis testing and false discovery rate (FDR) estimation based on the methods proposed in M. Stephens, 2016, "False discovery rates: a new deal", <DOI:10.1093/biostatistics/kxw041>. These methods can be applied whenever two sets of summary statistics---estimated effects and standard errors---are available, just as 'qvalue' can be applied to previously computed p-values. Two main interfaces are provided: ash(), which is more user-friendly; and ash.workhorse(), which has more options and is geared toward advanced users. The ash() and ash.workhorse() also provides a flexible modeling interface that can accomodate a variety of likelihoods (e.g., normal, Poisson) and mixture priors (e.g., uniform, normal). 2019-07-21
r-als public Alternating least squares is often used to resolve components contributing to data with a bilinear structure; the basic technique may be extended to alternating constrained least squares. Commonly applied constraints include unimodality, non-negativity, and normalization of components. Several data matrices may be decomposed simultaneously by assuming that one of the two matrices in the bilinear decomposition is shared between datasets. 2019-07-21
r-anom public Analysis of means (ANOM) as used in technometrical computing. The package takes results from multiple comparisons with the grand mean (obtained with 'multcomp', 'SimComp', 'nparcomp', or 'MCPAN') or corresponding simultaneous confidence intervals as input and produces ANOM decision charts that illustrate which group means deviate significantly from the grand mean. 2019-07-21
r-argonr public R wrapper around the argon HTML library. More at <https://demos.creative-tim.com/argon-design-system/>. 2019-07-21
r-argparse public A command line parser to be used with Rscript to write "#!" shebang scripts that gracefully accept positional and optional arguments and automatically generate usage. 2019-07-21
r-aplpack public Some functions for drawing some special plots: The function 'bagplot' plots a bagplot, 'faces' plots chernoff faces, 'iconplot' plots a representation of a frequency table or a data matrix, 'plothulls' plots hulls of a bivariate data set, 'plotsummary' plots a graphical summary of a data set, 'puticon' adds icons to a plot, 'skyline.hist' combines several histograms of a one dimensional data set in one plot, 'slider' functions supports some interactive graphics, 'spin3R' helps an inspection of a 3-dim point cloud, 'stem.leaf' plots a stem and leaf plot, 'stem.leaf.backback' plots back-to-back versions of stem and leaf plot. 2019-07-21
r-biganalytics public Extend the 'bigmemory' package with various analytics. Functions 'bigkmeans' and 'binit' may also be used with native R objects. For 'tapply'-like functions, the bigtabulate package may also be helpful. For linear algebra support, see 'bigalgebra'. For mutex (locking) support for advanced shared-memory usage, see 'synchronicity'. 2019-07-21
r-argumentcheck public The typical process of checking arguments in functions is iterative. In this process, an error may be returned and the user may fix it only to receive another error on a different argument. 'ArgumentCheck' facilitates a more helpful way to perform argument checks allowing the programmer to run all of the checks and then return all of the errors and warnings in a single message. 2019-07-21
r-asbio public Contains functions from: Aho, K. (2014) Foundational and Applied Statistics for Biologists using R. CRC/Taylor and Francis, Boca Raton, FL, ISBN: 978-1-4398-7338-0. 2019-07-21
r-argparser public Cross-platform command-line argument parser written purely in R with no external dependencies. It is useful with the Rscript front-end and facilitates turning an R script into an executable script. 2019-07-21
r-arsenal public An Arsenal of 'R' functions for large-scale statistical summaries, which are streamlined to work within the latest reporting tools in 'R' and 'RStudio' and which use formulas and versatile summary statistics for summary tables and models. The primary functions include tableby(), a Table-1-like summary of multiple variable types 'by' the levels of one or more categorical variables; paired(), a Table-1-like summary of multiple variable types paired across two time points; modelsum(), which performs simple model fits on one or more endpoints for many variables (univariate or adjusted for covariates); freqlist(), a powerful frequency table across many categorical variables; comparedf(), a function for comparing data.frames; and write2(), a function to output tables to a document. 2019-07-21
r-aroma.apd public DEPRECATED. Do not start building new projects based on this package. (The (in-house) APD file format was initially developed to store Affymetrix probe-level data, e.g. normalized CEL intensities. Chip types can be added to APD file and similar to methods in the affxparser package, this package provides methods to read APDs organized by units (probesets). In addition, the probe elements can be arranged optimally such that the elements are guaranteed to be read in order when, for instance, data is read unit by unit. This speeds up the read substantially. This package is supporting the Aroma framework and should not be used elsewhere.) 2019-07-21
r-assertr public Provides functionality to assert conditions that have to be met so that errors in data used in analysis pipelines can fail quickly. Similar to 'stopifnot()' but more powerful, friendly, and easier for use in pipelines. 2019-07-21
PRIVACY POLICY  |  EULA (Anaconda Cloud v2.33.29) © 2019 Anaconda, Inc. All Rights Reserved.