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r-starticles
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public |
Provides a generic, publisher-independent Rmarkdown template for writing scientific papers and reports in Rmarkdown. The template allows for all the basic features of a scientific article, including a title page with author affiliations and footnotes possibly shown in two common formats, multi-language abstracts and keywords, page headers and footers, and the ability to place figures and tables at the end of the output PDF. Smart cross-referencing of figures, tables, equations and sections is provided using the bookdown package. See package README.md for basic package usage.
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2025-09-24 |
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fsl-sub-plugin-slurm
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public |
FSL Cluster Submission Plugin for Slurm
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2025-09-24 |
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r-chemometricswithr
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public |
Functions and scripts used in the book "Chemometrics with R - Multivariate Data Analysis in the Natural Sciences and Life Sciences" by Ron Wehrens, Springer (2011). Data used in the package are available from github.
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2025-09-24 |
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r-ggalt
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public |
A compendium of new geometries, coordinate systems, statistical transformations, scales and fonts for 'ggplot2', including splines, 1d and 2d densities, univariate average shifted histograms, a new map coordinate system based on the 'PROJ.4'-library along with geom_cartogram() that mimics the original functionality of geom_map(), formatters for "bytes", a stat_stepribbon() function, increased 'plotly' compatibility and the 'StateFace' open source font 'ProPublica'. Further new functionality includes lollipop charts, dumbbell charts, the ability to encircle points and coordinate-system-based text annotations.
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2025-09-24 |
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level-zero-devel
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public |
No Summary
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2025-09-24 |
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level-zero
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public |
No Summary
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2025-09-24 |
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r-saver
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public |
An implementation of a regularized regression prediction and empirical Bayes method to recover the true gene expression profile in noisy and sparse single-cell RNA-seq data. See Huang M, et al (2018) <doi:10.1038/s41592-018-0033-z> for more details.
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2025-09-24 |
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libcxx
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public |
LLVM C++ standard library
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2025-09-24 |
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libcxx-devel
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public |
LLVM C++ standard library
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2025-09-24 |
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r-metrica
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public |
A compilation of more than 80 functions designed to quantitatively and visually evaluate prediction performance of regression (continuous variables) and classification (categorical variables) of point-forecast models (e.g. APSIM, DSSAT, DNDC, supervised Machine Learning). For regression, it includes functions to generate plots (scatter, tiles, density, & Bland-Altman plot), and to estimate error metrics (e.g. MBE, MAE, RMSE), error decomposition (e.g. lack of accuracy-precision), model efficiency (e.g. NSE, E1, KGE), indices of agreement (e.g. d, RAC), goodness of fit (e.g. r, R2), adjusted correlation coefficients (e.g. CCC, dcorr), symmetric regression coefficients (intercept, slope), and mean absolute scaled error (MASE) for time series predictions. For classification (binomial and multinomial), it offers functions to generate and plot confusion matrices, and to estimate performance metrics such as accuracy, precision, recall, specificity, F-score, Cohen's Kappa, G-mean, and many more. For more details visit the vignettes <https://adriancorrendo.github.io/metrica/>.
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2025-09-24 |
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r-pubmed.miner
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public |
Text mining of PubMed Abstracts (text and XML) from <http://www.ncbi.nlm.nih.gov/pubmed>.
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2025-09-24 |
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types-mock
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public |
Typing stubs for mock
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2025-09-24 |
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libcxxabi
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public |
LLVM C++ standard library
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2025-09-24 |
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lenstool
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public |
A gravitational lensing software for modeling mass distribution of galaxies and clusters (strong and weak regime).
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2025-09-24 |
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sardana-icepap
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public |
IcePAP plugins for Sardana
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2025-09-24 |
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r-kendall
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public |
Computes the Kendall rank correlation and Mann-Kendall trend test. See documentation for use of block bootstrap when there is autocorrelation.
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2025-09-24 |
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r-rvg
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public |
Vector Graphics devices for Microsoft PowerPoint and Excel. Functions extending package 'officer' are provided to embed 'DrawingML' graphics into 'Microsoft PowerPoint' presentations and 'Microsoft Excel' workbooks.
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2025-09-24 |
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r-rayshader
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public |
Uses a combination of raytracing and multiple hill shading methods to produce 2D and 3D data visualizations and maps. Includes water detection and layering functions, programmable color palette generation, several built-in textures for hill shading, 2D and 3D plotting options, a built-in path tracer, 'Wavefront' OBJ file export, and the ability to save 3D visualizations to a 3D printable format.
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2025-09-24 |
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r-aplpack
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public |
Some functions for drawing some special plots: The function 'bagplot' plots a bagplot, 'faces' plots chernoff faces, 'iconplot' plots a representation of a frequency table or a data matrix, 'plothulls' plots hulls of a bivariate data set, 'plotsummary' plots a graphical summary of a data set, 'puticon' adds icons to a plot, 'skyline.hist' combines several histograms of a one dimensional data set in one plot, 'slider' functions supports some interactive graphics, 'spin3R' helps an inspection of a 3-dim point cloud, 'stem.leaf' plots a stem and leaf plot, 'stem.leaf.backback' plots back-to-back versions of stem and leaf plot.
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2025-09-24 |
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r-ghibli
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public |
Colour palettes inspired by Studio Ghibli <https://en.wikipedia.org/wiki/Studio_Ghibli> films, ported to R for your enjoyment.
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2025-09-24 |
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r-academictwitter
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public |
Package to query the Twitter Academic Research Product Track (<https://developer.twitter.com/en/solutions/academic-research>), providing access to full-archive search and other v2 API endpoints. Functions are written with academic research in mind. They provide flexibility in how the user wishes to store collected data, and encourage regular storage of data to mitigate loss when collecting large volumes of tweets. They also provide workarounds to manage and reshape the format in which data is provided on the client side.
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2025-09-24 |
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r-coveffectsplot
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public |
Produce forest plots to visualize covariate effects using either the command line or an interactive 'Shiny' application.
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2025-09-24 |
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r-dbarts
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public |
Fits Bayesian additive regression trees (BART; Chipman, George, and McCulloch (2010) <doi:10.1214/09-AOAS285>) while allowing the updating of predictors or response so that BART can be incorporated as a conditional model in a Gibbs/Metropolis-Hastings sampler. Also serves as a drop-in replacement for package 'BayesTree'.
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2025-09-24 |
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r-nsga2r
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public |
This package provide functions for box-constrained multiobjective optimization using the elitist non-dominated sorting genetic algorithm - NSGA-II. Fast non-dominated sorting, crowding distance, tournament selection, simulated binary crossover, and polynomial mutation are called in the main program, nsga2R, to complete the search.
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2025-09-24 |
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r-anom
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public |
Analysis of means (ANOM) as used in technometrical computing. The package takes results from multiple comparisons with the grand mean (obtained with 'multcomp', 'SimComp', 'nparcomp', or 'MCPAN') or corresponding simultaneous confidence intervals as input and produces ANOM decision charts that illustrate which group means deviate significantly from the grand mean.
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2025-09-24 |
