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r-parmigene
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Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).
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2025-09-23 |
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r-datapasta
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RStudio addins and R functions that make copy-pasting vectors and tables to text painless.
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2025-09-23 |
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r-ddalpha
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Contains procedures for depth-based supervised learning, which are entirely non-parametric, in particular the DDalpha-procedure (Lange, Mosler and Mozharovskyi, 2014 <doi:10.1007/s00362-012-0488-4>). The training data sample is transformed by a statistical depth function to a compact low-dimensional space, where the final classification is done. It also offers an extension to functional data and routines for calculating certain notions of statistical depth functions. 50 multivariate and 5 functional classification problems are included.
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2025-09-23 |
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sqlmesh
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Efficient data transformation and modeling framework that is backwards compatible with dbt.
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2025-09-23 |
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ez-zarr
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Give easy, high-level access to ome-zarr filesets.
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2025-09-23 |
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supabase-auth
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Python client implementation for Supabase Auth
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2025-09-23 |
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r-protviz
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Helps with quality checks, visualizations and analysis of mass spectrometry data, coming from proteomics experiments. The package is developed, tested and used at the Functional Genomics Center Zurich. We use this package mainly for prototyping, teaching, and having fun with proteomics data. But it can also be used to do data analysis for small scale data sets.
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2025-09-23 |
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r-dplr
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Perform tree-ring analyses such as detrending, chronology building, and cross dating. Read and write standard file formats used in dendrochronology.
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2025-09-23 |
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r-cobs
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Qualitatively Constrained (Regression) Smoothing Splines via Linear Programming and Sparse Matrices.
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2025-09-23 |
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r-loe
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Local Ordinal embedding (LOE) is one of graph embedding methods for unweighted graphs.
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2025-09-23 |
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r-subselect
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A collection of functions which (i) assess the quality of variable subsets as surrogates for a full data set, in either an exploratory data analysis or in the context of a multivariate linear model, and (ii) search for subsets which are optimal under various criteria.
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2025-09-23 |
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r-lahman
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Provides the tables from the 'Sean Lahman Baseball Database' as a set of R data.frames. It uses the data on pitching, hitting and fielding performance and other tables from 1871 through 2018, as recorded in the 2019 version of the database. Documentation examples show how many baseball questions can be investigated.
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2025-09-23 |
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r-ggstar
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To create the regular polygon layer for easily discernible shapes, we developed the package, it can be easily used if you know the 'ggplot2'.
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2025-09-23 |
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r-stinepack
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A consistently well behaved method of interpolation based on piecewise rational functions using Stineman's algorithm.
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2025-09-23 |
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r-mapdata
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Supplement to maps package, providing the larger and/or higher-resolution databases.
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2025-09-23 |
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r-rsnps
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A programmatic interface to various 'SNP' 'datasets' on the web: 'OpenSNP' (<https://opensnp.org>), and 'NBCIs' 'dbSNP' database (<https://www.ncbi.nlm.nih.gov/projects/SNP>). Functions are included for searching for 'NCBI'. For 'OpenSNP', functions are included for getting 'SNPs', and data for 'genotypes', 'phenotypes', annotations, and bulk downloads of data by user.
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2025-09-23 |
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r-skewhyperbolic
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Functions are provided for the density function, distribution function, quantiles and random number generation for the skew hyperbolic t-distribution. There are also functions that fit the distribution to data. There are functions for the mean, variance, skewness, kurtosis and mode of a given distribution and to calculate moments of any order about any centre. To assess goodness of fit, there are functions to generate a Q-Q plot, a P-P plot and a tail plot.
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2025-09-23 |
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snowflake-connector-python
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Snowflake Connector for Python
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2025-09-23 |
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r-ghapps
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'GitHub' apps provide a powerful way to manage fine grained programmatic access to specific 'git' repositories, without having to create dummy users, and which are safer than a personal access token for automated tasks. This package extends the 'gh' package to let you authenticate and interact with 'GitHub' <https://docs.github.com/en/rest/overview> in 'R' as an app.
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2025-09-23 |
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r-pdist
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Computes the euclidean distance between rows of a matrix X and rows of another matrix Y. Previously, this could be done by binding the two matrices together and calling 'dist', but this creates unnecessary computation by computing the distances between a row of X and another row of X, and likewise for Y. pdist strictly computes distances across the two matrices, not within the same matrix, making computations significantly faster for certain use cases.
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2025-09-23 |
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r-liftr
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Persistent reproducible reporting by containerization of R Markdown documents.
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2025-09-23 |
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r-ukbtools
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A set of tools to create a UK Biobank <http://www.ukbiobank.ac.uk/> dataset from a UKB fileset (.tab, .r, .html), visualize primary demographic data for a sample subset, query ICD diagnoses, retrieve genetic metadata, read and write standard file formats for genetic analyses.
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2025-09-23 |
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r-quantpsyc
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Contains tools useful for data screening, testing moderation (Cohen et. al. 2003)<doi:10.4324/9780203774441>, mediation (MacKinnon et. al. 2002)<doi:10.1037/1082-989x.7.1.83> and estimating power (Murphy & Myors 2014)<ISBN:9781315773155>.
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2025-09-23 |
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r-eva
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Goodness-of-fit tests for selection of r in the r-largest order statistics (GEVr) model. Goodness-of-fit tests for threshold selection in the Generalized Pareto distribution (GPD). Random number generation and density functions for the GEVr distribution. Profile likelihood for return level estimation using the GEVr and Generalized Pareto distributions. P-value adjustments for sequential, multiple testing error control. Non-stationary fitting of GEVr and GPD.
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2025-09-23 |
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hypothesis
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A library for property based testing
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2025-09-23 |
