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Package Name Access Summary Updated
r-ryacas public Interface to the 'yacas' computer algebra system (<http://www.yacas.org/>). 2025-09-27
r-qpcr public Model fitting, optimal model selection and calculation of various features that are essential in the analysis of quantitative real-time polymerase chain reaction (qPCR). 2025-09-27
ssm-simulators public SSMS is a package collecting simulators and training data generators for a bunch of generative models of interest in the cognitive science / neuroscience and approximate bayesian computation communities 2025-09-27
r-kmlshape public K-means for longitudinal data using shape-respecting distance and shape-respecting means. 2025-09-26
trimesh public Import, export, process, analyze and view triangular meshes. 2025-09-26
gradio-client public Python library for easily interacting with trained machine learning models 2025-09-26
google-genai public GenAI Python SDK 2025-09-26
r-tsdist public A set of commonly used distance measures and some additional functions which, although initially not designed for this purpose, can be used to measure the dissimilarity between time series. These measures can be used to perform clustering, classification or other data mining tasks which require the definition of a distance measure between time series. 2025-09-26
zizmor public Static analysis for GitHub Actions 2025-09-26
r-clustcurv public A method for determining groups in multiple curves with an automatic selection of their number based on k-means or k-medians algorithms. The selection of the optimal number is provided by bootstrap methods. The methodology can be applied both in regression and survival framework. Implemented methods are: Grouping multiple survival curves described by Villanueva et al. (2018) <doi:10.1002/sim.8016>. 2025-09-26
r-kml3d public An implementation of k-means specifically design to cluster joint trajectories (longitudinal data on several variable-trajectories). Like 'kml', it provides facilities to deal with missing value, compute several quality criterion (Calinski and Harabatz, Ray and Turie, Davies and Bouldin, BIC,...) and propose a graphical interface for choosing the 'best' number of clusters. In addition, the 3D graph representing the mean joint-trajectories of each cluster can be exported through LaTeX in a 3D dynamic rotating PDF graph. 2025-09-26
r-threebrain public A fast, interactive cross-platform, and easy to share 'WebGL'-based 3D brain viewer that visualizes 'FreeSurfer' and/or 'AFNI/SUMA' surfaces. The viewer widget can be either standalone or embedded into 'R-shiny' applications. The standalone version only require a web browser with 'WebGL2' support (for example, 'Chrome', 'Firefox', 'Safari'), and can be inserted into any websites. The 'R-shiny' support allows the 3D viewer to be dynamically generated from reactive user inputs. Please check the publication by Wang, Magnotti, Zhang, and Beauchamp (2023, <doi:10.1523/ENEURO.0328-23.2023>) for electrode localization. This viewer has been fully adopted by 'RAVE' <https://openwetware.org/wiki/RAVE>, an interactive toolbox to analyze 'iEEG' data by Magnotti, Wang, and Beauchamp (2020, <doi:10.1016/j.neuroimage.2020.117341>). Please check 'citation("threeBrain")' for details. 2025-09-26
botocore public Low-level, data-driven core of boto 3. 2025-09-26
r-tigger public Infers the V genotype of an individual from immunoglobulin (Ig) repertoire sequencing data (AIRR-Seq, Rep-Seq). Includes detection of any novel alleles. This information is then used to correct existing V allele calls from among the sample sequences. Citations: Gadala-Maria, et al (2015) <doi:10.1073/pnas.1417683112>. Gadala-Maria, et al (2019) <doi:10.3389/fimmu.2019.00129>. 2025-09-26
codex public Lightweight coding agent that runs in your terminal 2025-09-26
ffmpeg public Cross-platform solution to record, convert and stream audio and video. 2025-09-26
s1_frame_enumerator public Enumerate interferogram pairs from ARIA spatially fixed frames 2025-09-26
r-spatialvx public Spatial forecast verification arose from verifying high-resolution forecasts, where coarser-resolution models generally are favored even when a human forecaster finds the higher-resolution model to be considerably better. Most newly proposed methods, which largely come from image analysis, computer vision, and similar, are available, with more on the way. 2025-09-26
r-wdman public There are a number of binary files associated with the 'Webdriver'/'Selenium' project (see <http://www.seleniumhq.org/download/>, <https://sites.google.com/a/chromium.org/chromedriver/>, <https://github.com/mozilla/geckodriver>, <http://phantomjs.org/download.html> and <https://github.com/SeleniumHQ/selenium/wiki/InternetExplorerDriver> for more information). This package provides functions to download these binaries and to manage processes involving them. 2025-09-26
minio public MinIO Python Library for Amazon S3 Compatible Cloud Storage for Python 2025-09-26
r-ecospat public Collection of R functions and data sets for the support of spatial ecology analyses with a focus on pre, core and post modelling analyses of species distribution, niche quantification and community assembly. Written by current and former members and collaborators of the ecospat group of Antoine Guisan, Department of Ecology and Evolution (DEE) and Institute of Earth Surface Dynamics (IDYST), University of Lausanne, Switzerland. Read Di Cola et al. (2016) <doi:10.1111/ecog.02671> for details. 2025-09-26
pandas-stubs public Collection of Pandas stub files 2025-09-26
boto3-stubs-lite-essential public Type annotations for boto3 1.40.40, generated with mypy-boto3-builder 2025-09-26
boto3-stubs-lite public Type annotations for boto3 1.40.40, generated with mypy-boto3-builder 2025-09-26
flang public Flang is a Fortran compiler targeting LLVM. 2025-09-26

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