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r-luz
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public |
A high level interface for 'torch' providing utilities to reduce the the amount of code needed for common tasks, abstract away torch details and make the same code work on both the 'CPU' and 'GPU'. It's flexible enough to support expressing a large range of models. It's heavily inspired by 'fastai' by Howard et al. (2020) <arXiv:2002.04688>, 'Keras' by Chollet et al. (2015) and 'PyTorch Lightning' by Falcon et al. (2019) <doi:10.5281/zenodo.3828935>.
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2025-09-24 |
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r-tdboost
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public |
A boosted Tweedie compound Poisson model using the gradient boosting. It is capable of fitting a flexible nonlinear Tweedie compound Poisson model (or a gamma model) and capturing interactions among predictors.
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2025-09-24 |
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r-leaflegend
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public |
Provides extensions to the 'leaflet' package to customize legends with images, text styling, orientation, sizing, and symbology and functions to create symbols to plot on maps.
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2025-09-24 |
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r-gsdesign
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public |
Derives group sequential designs and describes their properties.
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2025-09-24 |
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r-edina
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public |
Perform a Bayesian estimation of the exploratory deterministic input, noisy and gate (EDINA) cognitive diagnostic model described by Chen et al. (2018) <doi:10.1007/s11336-017-9579-4>.
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2025-09-24 |
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r-gggenomes
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public |
An extension of 'ggplot2' for creating complex genomic maps. It builds on the power of 'ggplot2' and 'tidyverse' adding new 'ggplot2'-style geoms & positions and 'dplyr'-style verbs to manipulate the underlying data. It implements a layout concept inspired by 'ggraph' and introduces tracks to bring tidiness to the mess that is genomics data.
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2025-09-24 |
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r-flowchart
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public |
Creates participant flow diagrams directly from a dataframe. Representing the flow of participants through each stage of a study, especially in clinical trials, is essential to assess the generalisability and validity of the results. This package provides a set of functions that can be combined with a pipe operator to create all kinds of flowcharts from a data frame in an easy way.
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2025-09-24 |
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r-didforbigdata
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public |
Provides a big-data-friendly and memory-efficient difference-in-differences estimator for staggered (and non-staggered) treatment contexts.
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2025-09-24 |
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r-correctr
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Calculate a set of corrected test statistics for cases when samples are not independent, such as when classification accuracy values are obtained over resamples or through k-fold cross-validation, as proposed by Nadeau and Bengio (2003) <doi:10.1023/A:1024068626366> and presented in Bouckaert and Frank (2004) <doi:10.1007/978-3-540-24775-3_3>.
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2025-09-24 |
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r-dalextra
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public |
Provides wrapper of various machine learning models. In applied machine learning, there is a strong belief that we need to strike a balance between interpretability and accuracy. However, in field of the interpretable machine learning, there are more and more new ideas for explaining black-box models, that are implemented in 'R'. 'DALEXtra' creates 'DALEX' Biecek (2018) <arXiv:1806.08915> explainer for many type of models including those created using 'python' 'scikit-learn' and 'keras' libraries, and 'java' 'h2o' library. Important part of the package is Champion-Challenger analysis and innovative approach to model performance across subsets of test data presented in Funnel Plot.
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2025-09-24 |
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r-bactdating
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public |
BactDating is a R package to perform Bayesian inference of ancestral dates on bacterial phylogenetic trees.
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2025-09-24 |
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r-batch
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public |
Functions to allow you to easily pass command-line arguments into R, and functions to aid in submitting your R code in parallel on a cluster and joining the results afterward (e.g. multiple parameter values for simulations running in parallel, splitting up a permutation test in parallel, etc.). See `parseCommandArgs(...)' for the main example of how to use this package.
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2025-09-24 |
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r-cmdstanr
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public |
CmdStanR is a lightweight interface to Stan for R users
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2025-09-24 |
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r-ggedit
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public |
Interactively edit 'ggplot2' layer and theme aesthetics definitions.
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2025-09-24 |
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r-shinycustomloader
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public |
A custom css/html or gif/image file for the loading screen in R 'shiny'. It also can use the marquee to have custom text loading screen.
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2025-09-24 |
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r-theft
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public |
Consolidates and calculates different sets of time-series features from multiple 'R' and 'Python' packages including 'Rcatch22' Henderson, T. (2021) <doi:10.5281/zenodo.5546815>, 'feasts' O'Hara-Wild, M., Hyndman, R., and Wang, E. (2021) <https://CRAN.R-project.org/package=feasts>, 'tsfeatures' Hyndman, R., Kang, Y., Montero-Manso, P., Talagala, T., Wang, E., Yang, Y., and O'Hara-Wild, M. (2020) <https://CRAN.R-project.org/package=tsfeatures>, 'tsfresh' Christ, M., Braun, N., Neuffer, J., and Kempa-Liehr A.W. (2018) <doi:10.1016/j.neucom.2018.03.067>, 'TSFEL' Barandas, M., et al. (2020) <doi:10.1016/j.softx.2020.100456>, and 'Kats' Facebook Infrastructure Data Science (2021) <https://facebookresearch.github.io/Kats/>. Provides a standardised workflow from feature calculation to feature processing, machine learning classification procedures, and the production of statistical graphics.
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2025-09-24 |
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r-bdrc
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Fits a discharge rating curve based on the power-law and the generalized power-law from data on paired stage and discharge measurements in a given river using a Bayesian hierarchical model as described in Hrafnkelsson et al. (2020) <arXiv:2010.04769>.
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2025-09-24 |
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r-bacondecomp
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Decomposition for differences-in-differences with variation in treatment timing from Goodman-Bacon (2018) <doi:10.3386/w25018>.
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2025-09-24 |
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bitarray
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public |
efficient arrays of booleans -- C extension
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2025-09-24 |
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r-editdata
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public |
An 'RStudio' addin for editing a 'data.frame' or a 'tibble'. You can delete, add or update a 'data.frame' without coding. You can get resultant data as a 'data.frame'. In the package, modularized 'shiny' app codes are provided. These modules are intended for reuse across applications.
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2025-09-24 |
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r-htmltab
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public |
HTML tables are a valuable data source but extracting and recasting these data into a useful format can be tedious. This package allows to collect structured information from HTML tables. It is similar to `readHTMLTable()` of the XML package but provides three major advantages. First, the function automatically expands row and column spans in the header and body cells. Second, users are given more control over the identification of header and body rows which will end up in the R table, including semantic header information that appear throughout the body. Third, the function preprocesses table code, corrects common types of malformations, removes unneeded parts and so helps to alleviate the need for tedious post-processing.
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2025-09-24 |
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libpostal
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public |
C library for parsing/normalizing street addresses around the world.
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2025-09-24 |
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r-dtangle
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public |
Deconvolving cell types from high-throughput gene profiling data.
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2025-09-24 |
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r-rcppsimdjson
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public |
The 'JSON' format is ubiquitous for data interchange, and the 'simdjson' library written by Daniel Lemire (and many contributors) provides a high-performance parser for these files which by relying on parallel 'SIMD' instruction manages to parse these files as faster than disk speed. See the <arXiv:1902.08318> paper for more details about 'simdjson'. This package parses 'JSON' from string, file, or remote URLs under a variety of settings.
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2025-09-24 |
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sqlframe
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public |
Turning PySpark Into a Universal DataFrame API
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2025-09-24 |
