Package Name | Access | Summary | Updated |
---|---|---|---|

urbansim_defaults | public | Starter models and functionality to use with UrbanSim | 2019-06-20 |

r-raster | public | Reading, writing, manipulating, analyzing and modeling of gridded spatial data. The package implements basic and high-level functions. Processing of very large files is supported. | 2019-06-20 |

voila-gridstack | public | Gridstack template for voila | 2019-06-20 |

flask-rest-api | public | DB agnostic framework to build auto-documented REST APIs with Flask and marshmallow | 2019-06-20 |

r-rann | public | Finds the k nearest neighbours for every point in a given dataset in O(N log N) time using Arya and Mount's ANN library (v1.1.3). There is support for approximate as well as exact searches, fixed radius searches and 'bd' as well as 'kd' trees. The distance is computed using the L2 (Euclidean) metric. Please see package 'RANN.L1' for the same functionality using the L1 (Manhattan, taxicab) metric. | 2019-06-20 |

r-proxy | public | Provides an extensible framework for the efficient calculation of auto- and cross-proximities, along with implementations of the most popular ones. | 2019-06-20 |

r-polspline | public | Routines for the polynomial spline fitting routines hazard regression, hazard estimation with flexible tails, logspline, lspec, polyclass, and polymars, by C. Kooperberg and co-authors. | 2019-06-20 |

sage | public | Sage - Open Source Mathematical Software | 2019-06-20 |

r-geometry | public | Makes the 'Qhull' library <http://www.qhull.org> available in R, in a similar manner as in Octave and MATLAB. Qhull computes convex hulls, Delaunay triangulations, halfspace intersections about a point, Voronoi diagrams, furthest-site Delaunay triangulations, and furthest-site Voronoi diagrams. It runs in 2D, 3D, 4D, and higher dimensions. It implements the Quickhull algorithm for computing the convex hull. Qhull does not support constrained Delaunay triangulations, or mesh generation of non-convex objects, but the package does include some R functions that allow for this. | 2019-06-20 |

r-coin | public | Conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems. | 2019-06-20 |

r-castor | public | Efficient phylogenetic analyses on massive phylogenies comprising up to millions of tips. Functions include pruning, rerooting, calculation of most-recent common ancestors, calculating distances from the tree root and calculating pairwise distances. Calculation of phylogenetic signal and mean trait depth (trait conservatism), ancestral state reconstruction and hidden character prediction of discrete characters, simulating and fitting models of trait evolution, fitting and simulating diversification models, dating trees, comparing trees, and reading/writing trees in Newick format. Citation: Louca, Stilianos and Doebeli, Michael (2017) <doi:10.1093/bioinformatics/btx701>. | 2019-06-20 |

r-cba | public | Implements clustering techniques such as Proximus and Rock, utility functions for efficient computation of cross distances and data manipulation. | 2019-06-20 |

r-dbplyr | public | A 'dplyr' back end for databases that allows you to work with remote database tables as if they are in-memory data frames. Basic features works with any database that has a 'DBI' back end; more advanced features require 'SQL' translation to be provided by the package author. | 2019-06-20 |

r-cairo | public | R graphics device using cairographics library that can be used to create high-quality vector (PDF, PostScript and SVG) and bitmap output (PNG,JPEG,TIFF), and high-quality rendering in displays (X11 and Win32). Since it uses the same back-end for all output, copying across formats is WYSIWYG. Files are created without the dependence on X11 or other external programs. This device supports alpha channel (semi-transparent drawing) and resulting images can contain transparent and semi-transparent regions. It is ideal for use in server environments (file output) and as a replacement for other devices that don't have Cairo's capabilities such as alpha support or anti-aliasing. Backends are modular such that any subset of backends is supported. | 2019-06-20 |

sagemath-db-elliptic-curves | public | A small subset of the data in John Cremona's database of elliptic curves up to conductor 10000 and William Stein's database of interesting curves | 2019-06-20 |

qgis | public | A free and open source Geographic Information System (GIS). | 2019-06-20 |

adaptive-scheduler | public | An asynchronous scheduler for Adaptive | 2019-06-20 |

gobject-introspection | public | Middleware for binding GObject-based code to other languages. | 2019-06-20 |

bilby_pipe | public | Automating the running of bilby for gravitational wave signals | 2019-06-20 |

gawk | public | The awk utility interprets a special-purpose programming language that makes it easy to handle simple data-reformatting jobs. | 2019-06-20 |

miniwdl | public | A static analysis toolkit for the Workflow Description Language | 2019-06-20 |

aiohttp-jinja2 | public | jinja2 template renderer for aiohttp.web (http server for asyncio) | 2019-06-20 |

aiohttp-session | public | sessions for aiohttp.web | 2019-06-20 |

aiomcache | public | Minimal pure python memcached client | 2019-06-20 |

aioredis | public | asyncio (PEP 3156) Redis support | 2019-06-20 |

janus | public | Mixed sync-async queue to interoperate between asyncio tasks and classic threads | 2019-06-20 |

aiohttp-security | public | security for aiohttp.web | 2019-06-20 |

linbox | public | C++ library for exact, high-performance linear algebra | 2019-06-20 |

eclib | public | The eclib package includes mwrank (for 2-descent on elliptic curves over Q) and modular symbol code used to create the elliptic curve database. | 2019-06-20 |

singular | public | Singular is a computer algebra system for polynomial computations, with special emphasis on commutative and non-commutative algebra, algebraic geometry, and singularity theory | 2019-06-20 |

gmt | public | The Generic Mapping Tools. | 2019-06-20 |

xorg-libxi | public | The X.org input library. | 2019-06-20 |

awscli | public | Universal Command Line Environment for AWS. | 2019-06-20 |

gdal | public | GDAL is a translator library for raster and vector geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. | 2019-06-20 |

libgdal | public | The Geospatial Data Abstraction Library (GDAL) | 2019-06-20 |

phonopy | public | Phonopy is an open source package for phonon calculations at harmonic and quasi-harmonic levels. | 2019-06-19 |

r-urltools | public | A toolkit for all URL-handling needs, including encoding and decoding, parsing, parameter extraction and modification. All functions are designed to be both fast and entirely vectorised. It is intended to be useful for people dealing with web-related datasets, such as server-side logs, although may be useful for other situations involving large sets of URLs. | 2019-06-19 |

skorch | public | A scikit-learn compatible neural network library that wraps pytorch | 2019-06-19 |

r-lobstr | public | A set of tools for inspecting and understanding R data structures inspired by str(). Includes ast() for visualizing abstract syntax trees, ref() for showing shared references, cst() for showing call stack trees, and obj_size() for computing object sizes. | 2019-06-19 |

r-tmb | public | With this tool, a user should be able to quickly implement complex random effect models through simple C++ templates. The package combines 'CppAD' (C++ automatic differentiation), 'Eigen' (templated matrix-vector library) and 'CHOLMOD' (sparse matrix routines available from R) to obtain an efficient implementation of the applied Laplace approximation with exact derivatives. Key features are: Automatic sparseness detection, parallelism through 'BLAS' and parallel user templates. | 2019-06-19 |

r-stanheaders | public | The C++ header files of the Stan project are provided by this package, but it contains no R code or function documentation. There is a shared object containing part of the 'CVODES' library, but it is not accessible from R. 'StanHeaders' is only useful for developers who want to utilize the 'LinkingTo' directive of their package's DESCRIPTION file to build on the Stan library without incurring unnecessary dependencies. The Stan project develops a probabilistic programming language that implements full or approximate Bayesian statistical inference via Markov Chain Monte Carlo or 'variational' methods and implements (optionally penalized) maximum likelihood estimation via optimization. The Stan library includes an advanced automatic differentiation scheme, 'templated' statistical and linear algebra functions that can handle the automatically 'differentiable' scalar types (and doubles, 'ints', etc.), and a parser for the Stan language. The 'rstan' package provides user-facing R functions to parse, compile, test, estimate, and analyze Stan models. | 2019-06-19 |

boto3 | public | Amazon Web Services SDK for Python | 2019-06-19 |

r-rrcov | public | Robust Location and Scatter Estimation and Robust Multivariate Analysis with High Breakdown Point. | 2019-06-19 |

r-ranger | public | A fast implementation of Random Forests, particularly suited for high dimensional data. Ensembles of classification, regression, survival and probability prediction trees are supported. Data from genome-wide association studies can be analyzed efficiently. In addition to data frames, datasets of class 'gwaa.data' (R package 'GenABEL') and 'dgCMatrix' (R package 'Matrix') can be directly analyzed. | 2019-06-19 |

r-mvtnorm | public | Computes multivariate normal and t probabilities, quantiles, random deviates and densities. | 2019-06-19 |

libcomcat | public | Python wrapper around ANSS ComCat API (plus tools). | 2019-06-19 |

r-registry | public | Provides a generic infrastructure for creating and using registries. | 2019-06-19 |

r-pls | public | Multivariate regression methods Partial Least Squares Regression (PLSR), Principal Component Regression (PCR) and Canonical Powered Partial Least Squares (CPPLS). | 2019-06-19 |

r-qvcalc | public | Functions to compute quasi variances and associated measures of approximation error. | 2019-06-19 |

r-elliptic | public | A suite of elliptic and related functions including Weierstrass and Jacobi forms. Also includes various tools for manipulating and visualizing complex functions. | 2019-06-19 |

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