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conda-forge / packages / r-sccore

Core utilities for single-cell RNA-seq data analysis. Contained within are utility functions for working with differential expression (DE) matrices and count matrices, a collection of functions for manipulating and plotting data via 'ggplot2', and functions to work with cell graphs and cell embeddings. Graph-based methods include embedding kNN cell graphs into a UMAP <doi:10.21105/joss.00861>, collapsing vertices of each cluster in the graph, and propagating graph labels.

copied from cf-staging / r-sccore

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Type Size Name Uploaded Downloads Labels
conda 859.8 kB | win-64/r-sccore-1.0.5-r43h8ae3a7c_2.conda  20 days and 5 hours ago 22 main
conda 853.1 kB | osx-64/r-sccore-1.0.5-r43h2711daa_2.conda  20 days and 5 hours ago 22 main
conda 846.5 kB | osx-arm64/r-sccore-1.0.5-r43h31118f2_2.conda  20 days and 5 hours ago 22 main
conda 852.8 kB | win-64/r-sccore-1.0.5-r44h8ae3a7c_2.conda  20 days and 5 hours ago 22 main
conda 846.2 kB | osx-64/r-sccore-1.0.5-r44h2711daa_2.conda  20 days and 5 hours ago 24 main
conda 839.7 kB | osx-arm64/r-sccore-1.0.5-r44h31118f2_2.conda  20 days and 5 hours ago 17 main
conda 868.7 kB | linux-aarch64/r-sccore-1.0.5-r43h21d2c02_2.conda  20 days and 5 hours ago 19 main
conda 862.1 kB | linux-ppc64le/r-sccore-1.0.5-r44h8455397_2.conda  20 days and 5 hours ago 9 main
conda 861.2 kB | linux-aarch64/r-sccore-1.0.5-r44h21d2c02_2.conda  20 days and 5 hours ago 16 main
conda 855.0 kB | linux-64/r-sccore-1.0.5-r44h93ab643_2.conda  20 days and 5 hours ago 110 main
conda 869.1 kB | linux-ppc64le/r-sccore-1.0.5-r43h8455397_2.conda  20 days and 5 hours ago 10 main
conda 862.1 kB | linux-64/r-sccore-1.0.5-r43h93ab643_2.conda  20 days and 5 hours ago 99 main
conda 852.1 kB | win-64/r-sccore-1.0.5-r44h8ae3a7c_1.conda  7 months and 8 days ago 476 main
conda 860.3 kB | win-64/r-sccore-1.0.5-r43h8ae3a7c_1.conda  7 months and 8 days ago 464 main
conda 853.2 kB | osx-64/r-sccore-1.0.5-r43h25d921d_1.conda  7 months and 8 days ago 404 main
conda 844.9 kB | osx-64/r-sccore-1.0.5-r44h25d921d_1.conda  7 months and 8 days ago 414 main
conda 860.8 kB | linux-64/r-sccore-1.0.5-r43h0d4f4ea_1.conda  7 months and 9 days ago 1132 main
conda 854.0 kB | linux-64/r-sccore-1.0.5-r44h0d4f4ea_1.conda  7 months and 9 days ago 1043 main
conda 865.0 kB | win-64/r-sccore-1.0.5-r41ha856d6a_0.conda  1 year and 17 days ago 522 main
conda 853.3 kB | osx-64/r-sccore-1.0.5-r43h29979af_0.conda  1 year and 17 days ago 416 main
conda 852.3 kB | osx-64/r-sccore-1.0.5-r42h29979af_0.conda  1 year and 17 days ago 383 main
conda 860.8 kB | linux-64/r-sccore-1.0.5-r43ha503ecb_0.conda  1 year and 17 days ago 1464 main
conda 860.1 kB | linux-64/r-sccore-1.0.5-r42ha503ecb_0.conda  1 year and 17 days ago 1404 main
conda 865.6 kB | win-64/r-sccore-1.0.4-r41ha856d6a_0.conda  1 year and 8 months ago 658 main
conda 855.0 kB | osx-64/r-sccore-1.0.4-r43hac7d2d5_0.conda  1 year and 8 months ago 414 main
conda 855.9 kB | osx-64/r-sccore-1.0.4-r42hac7d2d5_0.conda  1 year and 8 months ago 415 main
conda 860.1 kB | linux-64/r-sccore-1.0.4-r42ha503ecb_0.conda  1 year and 8 months ago 1538 main
conda 860.5 kB | linux-64/r-sccore-1.0.4-r43ha503ecb_0.conda  1 year and 8 months ago 1599 main
conda 865.3 kB | win-64/r-sccore-1.0.3-r41ha856d6a_1.conda  1 year and 8 months ago 696 main
conda 855.8 kB | osx-64/r-sccore-1.0.3-r42hac7d2d5_1.conda  1 year and 8 months ago 408 main
conda 855.4 kB | osx-64/r-sccore-1.0.3-r43hac7d2d5_1.conda  1 year and 8 months ago 424 main
conda 859.1 kB | linux-64/r-sccore-1.0.3-r43ha503ecb_1.conda  1 year and 8 months ago 1561 main
conda 859.4 kB | linux-64/r-sccore-1.0.3-r42ha503ecb_1.conda  1 year and 8 months ago 1526 main
conda 864.4 kB | win-64/r-sccore-1.0.3-r41ha856d6a_0.conda  1 year and 11 months ago 809 main
conda 857.4 kB | osx-64/r-sccore-1.0.3-r41h49197e3_0.conda  1 year and 11 months ago 404 main
conda 857.4 kB | osx-64/r-sccore-1.0.3-r42h49197e3_0.conda  1 year and 11 months ago 441 main
conda 859.6 kB | linux-64/r-sccore-1.0.3-r41h38f115c_0.conda  1 year and 11 months ago 1842 main
conda 859.2 kB | linux-64/r-sccore-1.0.3-r42h38f115c_0.conda  1 year and 11 months ago 1857 main
conda 901.4 kB | win-64/r-sccore-1.0.2-r41ha856d6a_1.tar.bz2  2 years and 5 months ago 564 main
conda 884.5 kB | osx-64/r-sccore-1.0.2-r42h49197e3_1.tar.bz2  2 years and 5 months ago 74 main
conda 888.8 kB | osx-64/r-sccore-1.0.2-r41h49197e3_1.tar.bz2  2 years and 5 months ago 78 main
conda 883.8 kB | linux-64/r-sccore-1.0.2-r42h7525677_1.tar.bz2  2 years and 5 months ago 1877 main
conda 881.2 kB | linux-64/r-sccore-1.0.2-r41h7525677_1.tar.bz2  2 years and 5 months ago 1799 main
conda 914.2 kB | win-64/r-sccore-1.0.2-r40ha856d6a_0.tar.bz2  2 years and 6 months ago 605 main
conda 896.7 kB | win-64/r-sccore-1.0.2-r41ha856d6a_0.tar.bz2  2 years and 6 months ago 598 main
conda 884.6 kB | osx-64/r-sccore-1.0.2-r41h49197e3_0.tar.bz2  2 years and 6 months ago 82 main
conda 885.6 kB | osx-64/r-sccore-1.0.2-r40h49197e3_0.tar.bz2  2 years and 6 months ago 77 main
conda 880.1 kB | linux-64/r-sccore-1.0.2-r41h7525677_0.tar.bz2  2 years and 6 months ago 1894 main
conda 883.5 kB | linux-64/r-sccore-1.0.2-r40h7525677_0.tar.bz2  2 years and 6 months ago 1913 main
conda 877.0 kB | osx-64/r-sccore-1.0.1-r41h9951f98_0.tar.bz2  3 years and 2 months ago 93 main
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