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r-ptxqc

Community

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the MaxQuant software suite. Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format. Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) 'doi:10.1021/acs.jproteome.5b00780'.

Installation

To install this package, run one of the following:

Conda
$conda install conda-forge::r-ptxqc

Usage Tracking

1.1.3
1.1.2
1.1.1
1.1.0
1.0.17
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Downloads (Last 6 months): 0

About

Summary

Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the MaxQuant software suite. Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format. Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) 'doi:10.1021/acs.jproteome.5b00780'.

Last Updated

Jul 16, 2025 at 14:43

License

BSD-3-Clause

Total Downloads

133.5K

Supported Platforms

noarch