conda-forge / packages / r-gprofiler2 0.2.0

A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (<https://biit.cs.ut.ee/gprofiler>). The main tools are: (1) 'g:GOSt' - functional enrichment analysis and visualization of gene lists; (2) 'g:Convert' - gene/protein/transcript identifier conversion across various namespaces; (3) 'g:Orth' - orthology search across species; (4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions, genes and variant effects This package is an R interface corresponding to the 2019 update of 'g:Profiler' and provides access to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the package 'gProfileR' for accessing older versions from the 'g:Profiler' toolset.

  • License: GPL-2
  • 14299 total downloads
  • Last upload: 8 months and 14 days ago

Installers

Info: This package contains files in non-standard labels.

conda install

  • noarch  v0.2.0
To install this package with conda run one of the following:
conda install -c conda-forge r-gprofiler2
conda install -c conda-forge/label/cf202003 r-gprofiler2

Description

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