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Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype.

copied from cf-staging / r-ddrtree
Type Size Name Uploaded Downloads Labels
conda 176.0 kB | win-64/r-ddrtree-0.1.5-r43h8ae3a7c_1007.conda  10 months and 15 days ago 249 main
conda 176.5 kB | win-64/r-ddrtree-0.1.5-r44h8ae3a7c_1007.conda  10 months and 15 days ago 292 main
conda 204.4 kB | osx-64/r-ddrtree-0.1.5-r43h25d921d_1007.conda  10 months and 15 days ago 232 main
conda 245.3 kB | linux-ppc64le/r-ddrtree-0.1.5-r44h4f8ea88_1007.conda  10 months and 15 days ago 135 main
conda 205.6 kB | osx-64/r-ddrtree-0.1.5-r44h25d921d_1007.conda  10 months and 15 days ago 236 main
conda 244.2 kB | linux-ppc64le/r-ddrtree-0.1.5-r43h4f8ea88_1007.conda  10 months and 15 days ago 137 main
conda 193.1 kB | linux-aarch64/r-ddrtree-0.1.5-r43h7d3bd7d_1007.conda  10 months and 15 days ago 261 main
conda 193.9 kB | linux-aarch64/r-ddrtree-0.1.5-r44h7d3bd7d_1007.conda  10 months and 15 days ago 166 main
conda 203.5 kB | linux-64/r-ddrtree-0.1.5-r44h0d4f4ea_1007.conda  10 months and 15 days ago 1309 main
conda 202.5 kB | linux-64/r-ddrtree-0.1.5-r43h0d4f4ea_1007.conda  10 months and 15 days ago 1682 main
conda 205.4 kB | linux-ppc64le/r-ddrtree-0.1.5-r42h46f38da_1006.conda  1 year and 9 months ago 139 main
conda 205.9 kB | linux-ppc64le/r-ddrtree-0.1.5-r43h46f38da_1006.conda  1 year and 9 months ago 153 main
conda 174.5 kB | linux-aarch64/r-ddrtree-0.1.5-r42h2f0025b_1006.conda  1 year and 9 months ago 149 main
conda 175.0 kB | linux-aarch64/r-ddrtree-0.1.5-r43h2f0025b_1006.conda  1 year and 9 months ago 134 main
conda 150.7 kB | win-64/r-ddrtree-0.1.5-r41hfa435f1_1006.conda  1 year and 11 months ago 476 main
conda 203.5 kB | osx-64/r-ddrtree-0.1.5-r42he965462_1006.conda  1 year and 11 months ago 246 main
conda 203.2 kB | osx-64/r-ddrtree-0.1.5-r43he965462_1006.conda  1 year and 11 months ago 229 main
conda 183.7 kB | linux-64/r-ddrtree-0.1.5-r43h59595ed_1006.conda  1 year and 11 months ago 2150 main
conda 184.2 kB | linux-64/r-ddrtree-0.1.5-r42h59595ed_1006.conda  1 year and 11 months ago 1828 main
conda 164.6 kB | win-64/r-ddrtree-0.1.5-r41hfa435f1_1005.tar.bz2  2 years and 7 months ago 545 main
conda 225.0 kB | osx-64/r-ddrtree-0.1.5-r42hf0c8a7f_1005.tar.bz2  2 years and 7 months ago 91 main
conda 224.9 kB | osx-64/r-ddrtree-0.1.5-r41hf0c8a7f_1005.tar.bz2  2 years and 7 months ago 94 main
conda 195.9 kB | linux-64/r-ddrtree-0.1.5-r41h27087fc_1005.tar.bz2  2 years and 7 months ago 2525 main
conda 196.2 kB | linux-64/r-ddrtree-0.1.5-r42h27087fc_1005.tar.bz2  2 years and 7 months ago 2218 main
conda 166.9 kB | win-64/r-ddrtree-0.1.5-r40hfa435f1_1004.tar.bz2  4 years and 6 days ago 807 main

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