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Fast hierarchical clustering routines for R and Python.

copied from cf-staging / fastcluster

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.2.6
  • osx-64 v1.2.6
  • win-64 v1.2.6
  • osx-arm64 v1.2.6
  • win-32 v1.1.24

conda install

To install this package run one of the following:
conda install conda-forge::fastcluster
conda install conda-forge/label/cf201901::fastcluster
conda install conda-forge/label/cf202003::fastcluster
conda install conda-forge/label/gcc7::fastcluster

Description

This library provides Python functions for hierarchical clustering. It generates hierarchical clusters from distance matrices or from vector data.

Part of this module is intended to replace the functions linkage, single, complete, average, weighted, centroid, median, ward in the module scipy.cluster.hierarchy with the same functionality but much faster algorithms. Moreover, the function linkage_vector provides memory-efficient clustering for vector data.

The interface is very similar to MATLAB’s Statistics Toolbox API to make code easier to port from MATLAB to Python/NumPy. The core implementation of this library is in C++ for efficiency.


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