| cc3d | 4.8.0 | Multiscale multicellular virtual tissue modeling and simulation environment | Apr 13, 2026 | MIT |
| cc3d-network-solvers | 0.3.1 | — | Jun 21, 2025 | MIT |
| cc3dext_maboss | 0.3.0 | MaBoSS integration in CompuCell3D | Jun 21, 2025 | MIT |
| cc3d-player5 | 4.8.0 | — | Mar 22, 2026 | LGPL |
| cc3d-twedit5 | 4.8.0 | — | Mar 22, 2026 | LGPL |
| compucell3d | 4.8.0 | Multiscale multicellular virtual tissue modeling and simulation environment | Mar 22, 2026 | GPL |
| tbb_full_dev | 4.3.1 | — | Mar 25, 2025 | — |
| jinja2 | 2.9.5 | An easy to use stand-alone template engine written in pure python. | Mar 25, 2025 | 3-Clause BSD |
| pyqtgraph | 0.10.0 | Scientific Graphics and GUI Library for Python | Mar 25, 2025 | MIT |
| webcolors | 1.9.1 | Library for working with HTML/CSS color formats in Python. | Mar 25, 2025 | BSD 3-Clause |
| scipy | 1.2.1 | Scientific Library for Python | Mar 25, 2025 | BSD 3-Clause |
| pyqt | 5.6.0 | Python binding of the cross-platform GUI toolkit Qt. | Mar 25, 2025 | Commercial, GPL-2.0, GPL-3.0 |
| sip | 4.19.18 | Create Python bindings for C and C++ libraries | Mar 25, 2025 | GPL-3.0 |
| qscintilla2 | 2.9.3 | Qscintilla2 editor for Qt | Mar 25, 2025 | GPL-3.0 |
| numpy | 1.16.2 | Array processing for numbers, strings, records, and objects. | Mar 25, 2025 | BSD 3-Clause |
| freetype | 2.7 | A Free, High-Quality, and Portable Font Engine | Mar 25, 2025 | GPL-2.0 and FreeType |
| libxml2 | 2.9.8 | The XML C parser and toolkit of Gnome | Mar 25, 2025 | MIT |
| jpeg | 9c | read/write jpeg COM, EXIF, IPTC medata | Mar 25, 2025 | IJG |
| libgfortran | 3.0.1 | Fortran libraries from the GNU Compiler Collection | Mar 25, 2025 | GPL 3 (with GCC Runtime Library Exception 3.1) |
| libpng | 1.6.37 | PNG reference library | Mar 25, 2025 | zlib/libpng |
| openblas | 0.3.5 | An optimized BLAS library based on GotoBLAS2 1.13 BSD version. | Mar 25, 2025 | BSD 3-Clause |
| libiconv | 1.15 | Provides iconv for systems which don't have one (or that cannot convert from/to Unicode.) | Mar 25, 2025 | GPL and LGPL |
| icu | 64.2 | International Components for Unicode. | Mar 25, 2025 | MIT |
| vtk | 8.2.0 | The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, modeling, image processing, volume rendering, scientific visualization, and information visualization.
| Mar 25, 2025 | BSD 3-Clause |
| blas | 1.1 | Metapackage to select the BLAS variant. Use conda's pinning mechanism in your environment to control which variant you want. | Mar 25, 2025 | BSD 3-clause |
