| Package Name | Access | Summary | Updated |
|---|---|---|---|
| perl-app-cpanminus | public | get, unpack, build and install modules from CPAN | 2025-03-25 |
| perl-appconfig | public | AppConfig is a bundle of Perl5 modules for reading configuration files and parsing command line arguments. | 2025-03-25 |
| perl-algorithm-munkres | public | Munkres.pm | 2025-03-25 |
| perl-algorithm-diff | public | Compute intelligent differences between two files / lists but use the old (<=0.59) interface. | 2025-03-25 |
| perl-aceperl | public | Object-Oriented Access to ACEDB Databases | 2025-03-25 |
| mutect | public | No Summary | 2025-03-25 |
| fastq-screen | public | FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect | 2025-03-25 |
| bowtie | public | An ultrafast memory-efficient short read aligner | 2025-03-25 |
| kraken | public | Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. | 2025-03-25 |
| jellyfish | public | Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence | 2025-03-25 |
| hla-polysolver | public | No Summary | 2025-03-25 |
| perl-pod-usage | public | print a usage message from embedded pod documentation | 2025-03-25 |
| perl-getopt-long | public | Module to handle parsing command line options | 2025-03-25 |
| raxml | public | Phylogenetics - Randomized Axelerated Maximum Likelihood | 2025-03-25 |
| trinity | public | Trinity RNA-Seq de novo transcriptome assembly | 2025-03-25 |
| salmon | public | Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments | 2025-03-25 |
| boost | public | No Summary | 2025-03-25 |
| r-base | public | R is a free software environment for statistical computing and graphics. | 2025-03-25 |
| optitype | public | Precision HLA typing from next-generation sequencing data | 2025-03-25 |
| pyomo | public | Pyomo: Python Optimization Modeling Objects | 2025-03-25 |
| mpc | public | A C library for the arithmetic of complex numbers with arbitrarily high precision. | 2025-03-25 |
| gmp | public | The GNU Multiple Precision Arithmetic Library | 2025-03-25 |
| mpfr | public | The MPFR library is a C library for multiple-precision floating-point computations with correct rounding. | 2025-03-25 |
| qualimap | public | Quality control of alignment sequencing data and its derivatives like feature counts | 2025-03-25 |
| isl | public | a thread-safe C library for manipulating sets and relations of integer points bounded by affine constraints. | 2025-03-25 |
