| Package Name | Access | Summary | Updated |
|---|---|---|---|
| perl-gdtextutil | public | Text utilities for use with GD | 2025-03-25 |
| edge-pro | public | EDGE-pro (Estimated Degree of Gene Expression in PROkaryotes) is an efficient software system to estimate gene expression levels in prokaryotic genomes from RNA-seq data. EDGE-pro uses Bowtie2 for alignment and then estimates expression directly from the alignment results. EDGE-pro includes routines to assign reads aligning to overlapping gene regions accurately. 15% or more of bacterial genes overlap other genes, making this a significant problem for bacterial RNA-seq, one that is generally ignored by programs designed for eukaryotic RNA-seq experiments. | 2025-03-25 |
| perl-switch | public | A switch statement for Perl, do not use if you can use given/when | 2025-03-25 |
| perl-text-balanced | public | Text::Balanced - Extract delimited text sequences from strings | 2025-03-25 |
| perl-if | public | use a Perl module if a condition holds | 2025-03-25 |
| perl-vcftools-vcf | public | cpanm ready distribution of VCFtools Perl libraries | 2025-03-25 |
| perl-time-hires | public | High resolution alarm, sleep, gettimeofday, interval timers | 2025-03-25 |
| perl-pod-escapes | public | for resolving Pod Elt...gt sequences | 2025-03-25 |
| perl-list-moreutils-xs | public | Provide the stuff missing in List::Util in XS | 2025-03-25 |
| perl-array-utils | public | small utils for array manipulation | 2025-03-25 |
| samtools | public | Tools for dealing with SAM, BAM and CRAM files | 2025-03-25 |
| perl-yaml | public | YAML Ain't Markup Language | 2025-03-25 |
| perl-xsloader | public | Dynamically load C libraries into Perl code | 2025-03-25 |
| perl-xml-xpathengine | public | a re-usable XPath engine for DOM-like trees | 2025-03-25 |
| perl-xml-xpath | public | Parse and evaluate XPath statements. | 2025-03-25 |
| perl-xml-writer | public | Easily generate well-formed, namespace-aware XML. | 2025-03-25 |
| perl-xml-twig | public | XML, The Perl Way | 2025-03-25 |
| perl-xml-simple | public | An API for simple XML files | 2025-03-25 |
| perl-xml-semanticdiff | public | Perl extension for comparing XML documents. | 2025-03-25 |
| perl-xml-sax-writer | public | SAX2 XML Writer | 2025-03-25 |
| perl-xml-sax-expat | public | SAX Driver for Expat | 2025-03-25 |
| perl-xml-sax-base | public | Base class for SAX Drivers and Filters | 2025-03-25 |
| perl-xml-sax | public | Simple API for XML | 2025-03-25 |
| perl-xml-regexp | public | Regular expressions for XML tokens | 2025-03-25 |
| perl-xml-parser-lite | public | Lightweight pure-perl XML Parser (based on regexps) | 2025-03-25 |
