|
vcftools
|
public |
No Summary
|
2023-06-16 |
|
novoalign
|
public |
No Summary
|
2023-06-16 |
|
yaggo
|
public |
Yaggo is a tool to generate command line parsers for C++. Yaggo stands for "Yet Another GenGetOpt" and is inspired by GNU Gengetopt.
|
2023-06-16 |
|
gcc
|
public |
No Summary
|
2023-06-16 |
|
bioflows
|
public |
No Summary
|
2023-06-16 |
|
qc3
|
public |
QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.
|
2023-06-16 |
|
perl-env
|
public |
perl module that imports environment variables as scalars or arrays
|
2023-06-16 |
|
mutect
|
public |
No Summary
|
2023-06-16 |
|
optitype
|
public |
Precision HLA typing from next-generation sequencing data
|
2023-06-16 |
|
star
|
public |
An RNA-seq read aligner.
|
2023-06-16 |
|
biopython
|
public |
Collection of freely available tools for computational molecular biology
|
2023-06-16 |
|
gatk
|
public |
No Summary
|
2023-06-16 |
|
lftp
|
public |
LFTP is a sophisticated file transfer program supporting a number of network protocols
(ftp, http, sftp, fish, torrent). Like BASH, it has job control and uses the readline
library for input. It has bookmarks, a built-in mirror command, and can transfer
several files in parallel. It was designed with reliability in mind.
|
2023-06-16 |
|
hisat2
|
public |
No Summary
|
2023-06-16 |
|
prinseq
|
public |
No Summary
|
2023-06-16 |
|
htseq
|
public |
No Summary
|
2023-06-16 |
|
saga-python
|
public |
No Summary
|
2023-06-16 |
|
htslib
|
public |
No Summary
|
2023-06-16 |
|
bcftools
|
public |
No Summary
|
2023-06-16 |
|
mummer
|
public |
No Summary
|
2023-06-16 |
|
trimmomatic
|
public |
No Summary
|
2023-06-16 |
|
binutils
|
public |
No Summary
|
2023-06-16 |
|
libgtextutils
|
public |
No Summary
|
2023-06-16 |
|
biobambam
|
public |
No Summary
|
2023-06-16 |
|
fastx_toolkit
|
public |
No Summary
|
2023-06-16 |
|
picard
|
public |
No Summary
|
2023-06-16 |
|
gsnap
|
public |
No Summary
|
2023-06-16 |
|
sra-tools
|
public |
No Summary
|
2023-06-16 |
|
bedtools
|
public |
A powerful toolset for genome arithmetic
|
2023-06-16 |
|
bowtie2
|
public |
No Summary
|
2023-06-16 |
|
fastqc
|
public |
No Summary
|
2023-06-16 |
|
hmmer
|
public |
No Summary
|
2023-06-16 |
|
bwa
|
public |
No Summary
|
2023-06-16 |
|
pysam
|
public |
No Summary
|
2023-06-16 |
