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colomoto / packages

Package Name Access Summary Updated
diptest public A Python/C(++) implementation of Hartigan & Hartigan's dip test for unimodality. 2024-11-08
bonesis public Synthesis of Most Permissive Boolean Networks 2024-10-23
colomoto_jupyter public CoLoMoTo helper functions for Juypter integration 2024-10-22
ginsim-python public GINsim and bioLQM python interface 2024-10-10
pyboolnet public Generation, modification and analysis of Boolean networks 2024-09-25
boon public Boolean Network Analysis 2024-09-24
pymaboss public Python API for the MaBoSS simulation software 2024-09-13
cmaboss public No Summary 2024-09-13
maboss public No Summary 2024-09-12
libsbml-plus-packages public LibSBML is a free, open-source programming library to help you read, write, manipulate, translate, and validate SBML files and data streams. 2024-08-29
mpbn public Simple implementation of Most Permissive semantics of Boolean networks 2024-08-28
z3-solver public an efficient SMT solver library 2024-06-28
scboolseq public scRNA-Seq data binarisation and synthetic generation from Boolean dynamics 2024-05-17
pystablemotifs public A PyBoolNet implementation of stable motif algorithms, including oscillation checking. 2023-12-17
pyeda public Python Electronic Design Automation 2023-11-28
espresso-logic-minimizer public No Summary 2023-11-22
quadprog public Quadratic Programming Solver 2023-10-20
cmappy public Assorted tools for interacting with .gct, .gctx, .grp, and .gmt files as well as other Connectivity Map (Broad Institute) data/tools 2023-10-19
profile_binr public PROFILE methodology for the binarisation and normalisation of RNA-seq data 2023-06-16
bns-python public Python interface to BNS 2023-06-16
booleannet public Boolean Network Modeling 2023-06-16
boolsim-python public Python interface to boolSim 2023-06-16
pyactonet public Abduction-base control of Boolean networks fixpoints 2023-06-16
caspo-control public Python wrapper for caspo control 2023-06-16
cabean-python public Python interface to CABEAN, A Software Tool for the Control of Asynchronous Boolean Networks 2023-06-16
stablemotifs-python public Python interface to Stable Motif Control Algorithm for Boolean Networks 2023-06-16
stablemotifs public No Summary 2023-06-16
cabean public A Software Tool for the Control of Asynchronous Boolean Networks 2023-06-16
algorecell_types public Generic types for reprogramming predictions from logical models 2023-06-16
nusmv-a public No Summary 2023-06-16
eqntott public No Summary 2023-06-16
bnettoprime public No Summary 2023-06-16
casq public CaSQ: Celldesigner as Sbml-Qual 2023-06-16
boolsim public No Summary 2023-06-16
bns public No Summary 2023-06-16
boolean.py public Define boolean algebras, create and parse boolean expressions and create custom boolean DSL. 2023-06-16
pypint public Python interface to Pint 2023-06-16
colomoto public No Summary 2023-06-16
its public No Summary 2023-06-16
pint public Static analyzer for dynamics of Automata Networks 2023-06-16
ginsim public No Summary 2023-06-16
nusmv-arctl public No Summary 2023-06-16
mole public No Summary 2023-06-16
pydot public Python interface to Graphviz's Dot 2023-06-16
nusmv public No Summary 2023-06-16
erode-python public ERODE with Python interface 2023-06-07

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