edurand
by edurand
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| alembic | 0.8.5 | — | Mar 25, 2025 | MIT |
| appdirs | 1.4.3 | — | Mar 25, 2025 | — |
| billiard | 3.3.0.21 | Python multiprocessing fork with improvements and bugfixes | Mar 25, 2025 | BSD |
| bioconductor-all | 1.14.0 | Data of T- and B-cell Acute Lymphocytic Leukemia from the Ritz Laboratory at the DFCI (includes Apr 2004 versions) | Mar 25, 2025 | Artistic-2.0 |
| bioconductor-annotationfuncs | 1.20.0 | Functions for handling translating between different identifieres using the Biocore Data Team data-packages (e.g. org.Bt.eg.db). | Mar 25, 2025 | GPL-2 |
| bioconductor-aroma.light | 3.2.0 | Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes. | Mar 25, 2025 | GPL (>= 2) |
| bioconductor-complexheatmap | 1.12.0 | — | Mar 25, 2025 | — |
| bioconductor-derfinder | 1.10.6 | — | Mar 25, 2025 | — |
| bioconductor-derfinderhelper | 1.10.0 | — | Mar 25, 2025 | — |
| bioconductor-edaseq | 2.6.2 | Numerical and graphical summaries of RNA-Seq read data. Within-lane normalization procedures to adjust for GC-content effect (or other gene-level effects) on read counts: loess robust local regression, global-scaling, and full-quantile normalization (Risso et al., 2011). Between-lane normalization procedures to adjust for distributional differences between lanes (e.g., sequencing depth): global-scaling and full-quantile normalization (Bullard et al., 2010). | Mar 25, 2025 | Artistic-2.0 |
| bioconductor-genomicfiles | 1.12.0 | — | Mar 25, 2025 | — |
| bioconductor-gviz | 1.20.0 | — | Mar 25, 2025 | — |
| bioconductor-homo.sapiens | 1.3.1 | Contains the Homo.sapiens object to access data from several related annotation packages. | Mar 25, 2025 | Artistic-2.0 |
| bioconductor-illuminahumanmethylation450kanno.ilmn12.hg19 | 0.2.1 | — | Mar 25, 2025 | — |
| bioconductor-pfam.db | 3.4.1 | — | Mar 25, 2025 | — |
| bioconductor-recount | 1.2.3 | — | Mar 25, 2025 | — |
| bioconductor-rhdf5 | 2.18.0 | — | Mar 25, 2025 | — |
| bioconductor-ruvseq | 1.6.2 | This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples. | Mar 25, 2025 | Artistic-2.0 |
| bioconductor-txdb.mmusculus.ucsc.mm10.knowngene | 3.2.2 | Exposes an annotation databases generated from UCSC by exposing these as TxDb objects | Mar 25, 2025 | Artistic-2.0 |
| bioconductor-tximport | 1.0.2 | Imports transcript-level abundance, estimated counts and transcript lengths, and summarizes into matrices for use with downstream gene-level analysis packages. Average transcript length, weighted by sample-specific transcript abundance estimates, is provided as a matrix which can be used as an offset for different expression of gene-level counts. | Mar 25, 2025 | GPL (>=2) |
| bioconductor-zlibbioc | 1.24.0 | — | Mar 25, 2025 | — |
| blinker | 1.4 | — | Mar 25, 2025 | — |
| celery | 3.1.19 | Distributed Task Queue | Mar 25, 2025 | BSD License |
| chartkick | 0.4.2 | — | Mar 25, 2025 | MIT |
| confluence-publisher | 1.2.1 | — | Mar 25, 2025 | — |