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bioconductor-hicbricks

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Framework for Storing and Accessing Hi-C Data Through HDF Files

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-hicbricks

Usage Tracking

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Downloads (Last 6 months): 0

Description

HiCBricks is a library designed for handling large high-resolution Hi-C datasets. Over the years, the Hi-C field has experienced a rapid increase in the size and complexity of datasets. HiCBricks is meant to overcome the challenges related to the analysis of such large datasets within the R environment. HiCBricks offers user-friendly and efficient solutions for handling large high-resolution Hi-C datasets. The package provides an R/Bioconductor framework with the bricks to build more complex data analysis pipelines and algorithms. HiCBricks already incorporates example algorithms for calling domain boundaries and functions for high quality data visualization.

About

Summary

Framework for Storing and Accessing Hi-C Data Through HDF Files

Last Updated

Dec 21, 2024 at 04:52

License

MIT + file LICENSE

Total Downloads

23.8K

Supported Platforms

noarch