bioconductor-fastqcleaner
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
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An interactive web application for quality control, filtering and trimming of FASTQ files. This user-friendly tool combines a pipeline for data processing based on Biostrings and ShortRead infrastructure, with a cutting-edge visual environment. Single-Read and Paired-End files can be locally processed. Diagnostic interactive plots (CG content, per-base sequence quality, etc.) are provided for both the input and output files.
Summary
A Shiny Application for Quality Control, Filtering and Trimming of FASTQ Files
Last Updated
Mar 1, 2026 at 02:48
License
MIT + file LICENSE
Total Downloads
34.5K
Version Downloads
298
Supported Platforms