r-microniche
Measures niche breadth and overlap of microbial taxa from large matrices.
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Description
Niche breadth measurements include Levins' niche breadth (Bn) index, Hurlbert's Bn and Feinsinger's proportional similarity (PS) index. (Feinsinger, P., Spears, E.E., Poole, R.W. (1981) ). Niche overlap measurements include Levin's Overlap (Ludwig, J.A. and Reynolds, J.F. (1988, ISBN:0471832359)) and a Jaccard similarity index of Feinsinger's PS values between taxa pairs, as Proportional Overlap.
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Summary
Measures niche breadth and overlap of microbial taxa from large matrices.
Last Updated
Feb 13, 2024 at 11:58
License
GPL-2
Total Downloads
2
Supported Platforms
linux-64