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r-lisi

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This method was designed to assess how well mixed cells with different labels are in single cell RNAseq. This method uses the Inverse Simpson's Index to compute diversity of each cell's local neighborhood.

Installation

To install this package, run one of the following:

Conda
$conda install bu_cnio::r-lisi

Usage Tracking

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About

Summary

This method was designed to assess how well mixed cells with different labels are in single cell RNAseq. This method uses the Inverse Simpson's Index to compute diversity of each cell's local neighborhood.

Last Updated

Sep 8, 2021 at 09:31

License

GPL-3

Total Downloads

74

Supported Platforms

linux-64
macOS-64