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viral-ngs-dev
|
public |
A set of scripts and tools for the analysis of viral NGS data
|
2025-03-25 |
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ncbitax
|
public |
Python API for working with NCBI taxonomy db
|
2025-03-25 |
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kraken2
|
public |
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.
|
2025-03-25 |
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trinity
|
public |
Trinity assembles transcript sequences from Illumina RNA-Seq data
|
2025-03-25 |
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krakenuniq
|
public |
Metagenomics classifier with unique k-mer counting for more specific results
|
2025-03-25 |
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dsub
|
public |
A command-line tool that makes it easy to submit and run batch scripts in the cloud
|
2025-03-25 |
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kaiju
|
public |
Fast and sensitive taxonomic classification for metagenomics
|
2025-03-25 |
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git-annex-remote-ldir
|
public |
git annex external special remote for local dirs
|
2025-03-25 |
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cromwell-tools
|
public |
Utilities for interacting with the Cromwell workflow engine
|
2025-03-25 |
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pehaplo
|
public |
Quasispecies assembler that uses paired-read information
|
2025-03-25 |
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genometools-genometools
|
public |
GenomeTools genome analysis system.
|
2025-03-25 |
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apsp
|
public |
String Overlap Finder
|
2025-03-25 |
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gap2seq
|
public |
Gap2Seq is a tool for filling gaps between contigs in genome assemblies.
|
2025-03-25 |
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kraken
|
public |
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.
|
2025-03-25 |
|
viral-ngs
|
public |
A set of scripts and tools for the analysis of viral NGS data
|
2025-03-25 |
