bird
by BiRD
The BiRD plateform from the university of Nantes provides different services involved in biological data analysis.
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Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| bioconductor-biocparallel | 1.6.6 | This package provides modified versions and novel implementation of functions for parallel evaluation, tailored to use with Bioconductor objects. | Mar 25, 2025 | GPL-2 | GPL-3 |
| bioconductor-scater | 1.4.0 | A collection of tools for doing various analyses of single-cell RNA-seq gene expression data, with a focus on quality control. | Mar 25, 2025 | GPL (>= 2) |
| deblur | 1.0.2 | — | Mar 25, 2025 | BSD license |
| deblurpipeline | 0.2.0 | — | Mar 25, 2025 | GNU General Public License version 3.0 (GPL-3.0) |
| deployer | 4.3.0 | — | Mar 25, 2025 | — |
| distance | 0.1.3 | — | Mar 25, 2025 | — |
| fastqc | 0.11.5 | — | Mar 25, 2025 | — |
| genescf | v1.1 | — | Mar 25, 2025 | — |
| gzip | 1.7 | — | Mar 25, 2025 | GPLv3 |
| iggy | 1.4.1 | Influence graph analysis, consistency check, diagnosis, repair and prediction | Mar 25, 2025 | GNU General Public License version 3.0 (GPLv3+) |
| meneco | 1.5.2 | A tool for the completion of metabolic networks | Mar 25, 2025 | GNU General Public License version 3.0 (GPLv3+) |
| menetools | 1.0.4 | Python 3 Metabolic Network Topology Tools | Mar 25, 2025 | GNU General Public License version 3.0 (GPLv3+) |
| perl | 5.20.3.1 | — | Mar 25, 2025 | — |
| pyasp | 1.4.3 | — | Mar 25, 2025 | GNU General Public License version 3.0 (GPLv3+) |
| pypogg | 15.07.5 | Probabilities on Genetic Graphs | Mar 25, 2025 | GNU General Public License version 3.0 (GPL-3.0) |
| q2-deblur | 2017.2.3 | — | Mar 25, 2025 | BSD license |
| q2-types | 2017.2.0 | Common QIIME 2 semantic types. | Mar 25, 2025 | BSD-3-Clause |
| q2cli | 2017.2.0 | — | Mar 25, 2025 | BSD-3-Clause |
| q2templates | 2017.2.0 | — | Mar 25, 2025 | BSD-3-Clause |
| qiime | 2.0.6 | — | Mar 25, 2025 | BSD-3-Clause |
| qiime2 | 2017.7.0 | — | Mar 25, 2025 | BSD-3-Clause |
| qt | 5.6.2 | Qt is a cross-platform application and UI framework. | Mar 25, 2025 | LGPL-3.0 |
| r-biclust | 1.2.0 | — | Mar 25, 2025 | — |
| r-epitools | 0.5_8 | — | Mar 25, 2025 | — |
| r-fabia | 2.20.0 | — | Mar 25, 2025 | — |