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r-nichenetr

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This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Installation

To install this package, run one of the following:

Conda
$conda install bioturing::r-nichenetr

Usage Tracking

2.0.0
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Downloads (Last 6 months): 0

About

Summary

This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Last Updated

Jul 8, 2023 at 05:13

License

GPL-3

Total Downloads

181

Version Downloads

181

Supported Platforms

linux-64