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zna

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High-performance binary format for compressed nucleic acid sequences

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::zna

Usage Tracking

0.3.0
0.2.0
0.1.8
3 / 8 versions selected
Downloads (Last 6 months): 0

Description

ZNA (Compressed Z-Nucleic N-Acid A) is a specialized binary format for storing DNA/RNA sequences with exceptional compression and I/O speed.

Features: - 135 MB/s roundtrip throughput (9.5x faster than Python baseline) - 2.8+ GB/s encoding/decoding for long reads - 3.7-4.0x compression ratio with Zstd - C++ acceleration with pure Python fallback - Block-based architecture for memory efficiency - Supports single-end, paired-end, and interleaved reads - Supports strand-specific protocols

About

Summary

High-performance binary format for compressed nucleic acid sequences

Last Updated

Mar 26, 2026 at 07:22

License

GPL-3.0-only

Total Downloads

2.5K

Version Downloads

636

Supported Platforms

linux-64
macOS-64
linux-aarch64
macOS-arm64