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stopfree

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Rust implementation of the stopFree coding potential tool

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::stopfree

Usage Tracking

0.2.4
1 / 8 versions selected
Downloads (Last 6 months): 0

Description

A fast Rust implementation (with Python bindings via PyO3) of the stopFree coding potential tool. It measures the longest stop codon free length of sequence in each of the 6 possible reading frames, calculates per-sequence GC content, and computes the probability of observing a stop-free run of the given length under an iid model corrected for GC content.

About

Summary

Rust implementation of the stopFree coding potential tool

Last Updated

Feb 24, 2026 at 08:50

License

Apache-2.0

Total Downloads

65

Version Downloads

65

Supported Platforms

linux-aarch64
linux-64
macOS-arm64
macOS-64