A set of wrappers for individual components of the Scater package. Functions R packages are hard to call when building workflows outside of R, so this package adds a set of simple wrappers with robust argument parsing. Intermediate steps are currently mainly serialized R objects, but the ultimate objective is to have language-agnostic intermediate formats allowing composite workflows using a variety of software packages.
To install this package, run one of the following:
Summary
A set of wrappers for individual components of the Scater package. Functions R packages are hard to call when building workflows outside of R, so this package adds a set of simple wrappers with robust argument parsing. Intermediate steps are currently mainly serialized R objects, but the ultimate objective is to have language-agnostic intermediate formats allowing composite workflows using a variety of software packages.
Information Last Updated
Apr 22, 2025 at 15:29
License
GPL-3
Total Downloads
3.2K
Platforms
GitHub Repository
https://github.com/ebi-gene-expression-group/bioconductor-scater-scripts