| Package Name | Access | Summary | Updated |
|---|---|---|---|
| jarvis | public | Efficient lossless compression of genomic sequences | 2025-08-10 |
| sts-smctc | public | A C++ template class library for the efficient and convenient implementation of very general Sequential Monte Carlo algorithms. | 2025-08-10 |
| gtfsort | public | A chr/pos/feature GTF sorter that uses a lexicographically-based index ordering algorithm. | 2025-08-10 |
| kallisto | public | Quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. | 2025-08-10 |
| ucsc-paratestjob | public | Version 12.18. | 2025-08-10 |
| vclust | public | Fast and accurate tool for calculating ANI and clustering virus genomes and metagenomes. | 2025-08-09 |
| afwdist | public | A lightweight tool to calculate a pairwise distance metric based on fixed and non-fixed allele frequencies. | 2025-08-09 |
| novae | public | Graph-based foundation model for spatial transcriptomics data. | 2025-08-09 |
| bwameth | public | A fast and accurate aligner of BS-seq reads. | 2025-08-09 |
| seqerakit | public | Automate creation of Seqera Platform resources | 2025-08-09 |
| im2deep | public | Framework for prediction of collisional cross-section of peptides. | 2025-08-09 |
| dbcanlight | public | A lightweight CAZyme annotation tool | 2025-08-09 |
| rsv-typer | public | Genotyping RSV samples from nanopore sequencing data | 2025-08-09 |
| edentity | public | eDentity metabarcoding pipeline | 2025-08-09 |
| shiba2sashimi | public | A utility for creating sashimi plot from Shiba output | 2025-08-09 |
| ebi-eva-common-pyutils | public | EBI EVA - Common Python Utilities. | 2025-08-09 |
| perl-specio | public | Type constraints and coercions for Perl | 2025-08-09 |
| pyopal | public | Cython bindings and Python interface to Opal, a SIMD-accelerated pairwise aligner. | 2025-08-08 |
| pgscatalog.core | public | Core tools for working with polygenic scores (PGS) and the PGS Catalog. | 2025-08-08 |
| inmoose | public | InMoose is the Integrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data. | 2025-08-08 |
| severus | public | A tool for somatic structural variant calling using long reads | 2025-08-08 |
| r-oncopharmadb | public | Targeted and non-targeted anticancer drugs and drug regimens | 2025-08-08 |
| minute | public | MINUTE-ChIP data analysis workflow | 2025-08-08 |
| kled | public | An ultra-fast and sensitive structural variant detection tool for long-read sequencing data. | 2025-08-08 |
| longcallr | public | A Rust tool for SNP calling and haplotype phasing with long RNA-seq reads. | 2025-08-08 |
