| Package Name | Access | Summary | Updated |
|---|---|---|---|
| fastoma | public | FastOMA - a package to infer orthology information among proteomes. | 2025-10-08 |
| cogent3 | public | COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs. | 2025-10-08 |
| cenote-taker3 | public | Cenote-Taker 3: Discover and annotate the virome. | 2025-10-08 |
| sigprofilerassignment | public | SigProfilerAssignment - Assignment of known mutational signatures to individual samples and individual somatic mutations | 2025-10-08 |
| genome-uploader | public | Python script to upload bins and MAGs in fasta format to ENA (European Nucleotide Archive). | 2025-10-08 |
| atol-qc-raw-ont | public | Run read QC on ONT reads. | 2025-10-08 |
| ezcharts | public | eCharts plotting API. | 2025-10-08 |
| truvari | public | Structural variant comparison tool for VCFs. | 2025-10-08 |
| deacon | public | Fast alignment-free sequence filter | 2025-10-08 |
| suchtree | public | A python library for doing fast, thread-safe computations on phylogenetic trees | 2025-10-08 |
| twilight | public | TWILIGHT: A high throughput tool for tall and wide multiple sequence alignment. | 2025-10-08 |
| nomadic | public | Mobile sequencing and analysis in real-time | 2025-10-08 |
| baitfisher | public | No Summary | 2025-10-08 |
| alcor | public | Software for alignment-free simulation, mapping, and visualization of low-complexity regions in FASTA data. | 2025-10-08 |
| akt | public | Ancestry and Kinship Tools (AKT) | 2025-10-08 |
| allegro | public | A fast linkage and haplotype analysis utility making use of MTBDD to reduce complexity. | 2025-10-08 |
| bioconda-repodata-patches | public | Generate tweaks to index metadata, hosted separately from anaconda.org index. | 2025-10-08 |
| gvcfgenotyper | public | A utility for merging and genotyping Illumina-style GVCFs. | 2025-10-07 |
| metawrap-mg | public | MetaWRAP is a pipeline for genome-resolved metagenomic data analysis | 2025-10-07 |
| orthanq | public | Uncertainty aware HLA typing and general haplotype quantification. | 2025-10-07 |
| grzctl | public | Control CLI for GRZ administrators. | 2025-10-07 |
| grz-cli | public | Tool for validation, encryption and upload of MV submissions to GDCs. | 2025-10-07 |
| grz-db | public | SQL models for grz-cli and grz-watchdog | 2025-10-07 |
| grz-pydantic-models | public | Pydantic models for the GRZ metadata schema | 2025-10-07 |
| snakedeploy | public | Helper for deploying published Snakemake pipelines. | 2025-10-07 |
