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bioconductor-a4preproc
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public |
Automated Affymetrix Array Analysis Preprocessing Package
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2024-12-16 |
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bioconductor-mfuzz
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public |
Soft clustering of omics time series data
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2024-12-16 |
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bioconductor-lapmix
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public |
Laplace Mixture Model in Microarray Experiments
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2024-12-16 |
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viral_consensus
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public |
Fast viral consensus genome reconstruction
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2024-12-16 |
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bioconductor-rbsurv
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public |
Robust likelihood-based survival modeling with microarray data
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2024-12-16 |
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ksnp
|
public |
k-mer based haplotype assembly
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2024-12-16 |
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r-classdiscovery
|
public |
Defines the classes used for "class discovery" problems in the OOMPA project (<http://oompa.r-forge.r-project.org/>). Class discovery primarily consists of unsupervised clustering methods with attempts to assess their statistical significance.
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2024-12-16 |
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dnmtools
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public |
dnmtools is a set of tools for analyzing DNA methylation data from bisulfite sequencing.
|
2024-12-16 |
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bioconductor-hybridmtest
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public |
Hybrid Multiple Testing
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2024-12-16 |
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gencore
|
public |
Generate consensus reads to reduce sequencing noises and remove duplications
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2024-12-16 |
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r-music
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public |
Companion package to: A bulk tissue deconvolution method with multi-subject single cell expression reference. This package provide functions to estimate bulk tissue cell type proportions with multi-subject single cell expression as reference.
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2024-12-16 |
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bioconductor-gwastools
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public |
Tools for Genome Wide Association Studies
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2024-12-16 |
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preseq
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public |
predicting library complexity and genome coverage in high-throughput sequencing
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2024-12-16 |
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bioconductor-rtpca
|
public |
Thermal proximity co-aggregation with R
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2024-12-16 |
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bioconductor-aims
|
public |
AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype
|
2024-12-16 |
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psirc
|
public |
Full-length linear and circular transcript isoform reconstruction and quantification.
|
2024-12-16 |
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bioconductor-nanotube
|
public |
An Easy Pipeline for NanoString nCounter Data Analysis
|
2024-12-16 |
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wally
|
public |
Visualization of aligned sequencing reads and genomic variants.
|
2024-12-16 |
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bioconductor-roastgsa
|
public |
Rotation based gene set analysis
|
2024-12-16 |
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bioconductor-clippda
|
public |
A package for the clinical proteomic profiling data analysis
|
2024-12-16 |
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r-aroma.core
|
public |
Core methods and classes used by higher-level 'aroma.*' packages part of the Aroma Project, e.g. 'aroma.affymetrix' and 'aroma.cn'.
|
2024-12-16 |
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smartmap
|
public |
SmartMap: Bayesian Analysis of Ambiguously Mapped Reads
|
2024-12-16 |
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bioconductor-cbpmanager
|
public |
Generate, manage, and edit data and metadata files suitable for the import in cBioPortal for Cancer Genomics
|
2024-12-16 |
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bioconductor-hca
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public |
Exploring the Human Cell Atlas Data Coordinating Platform
|
2024-12-16 |
|
bioconductor-snifter
|
public |
R wrapper for the python openTSNE library
|
2024-12-16 |
|
bioconductor-ihw
|
public |
Independent Hypothesis Weighting
|
2024-12-16 |
|
fastq-filter
|
public |
A fast FASTQ filter program.
|
2024-12-16 |
|
bpp-phyl
|
public |
Bio++ is a set of C++ libraries for Bioinformatics.
|
2024-12-16 |
|
ultraplex
|
public |
fastq demultiplexer
|
2024-12-16 |
|
cutadapt
|
public |
Trim adapters from high-throughput sequencing reads
|
2024-12-16 |
|
viewbs
|
public |
ViewBS is a powerful toolkit for visualization of high-throughput bisulfite sequencing data
|
2024-12-16 |
|
bioconductor-interactivedisplaybase
|
public |
Base package for enabling powerful shiny web displays of Bioconductor objects
|
2024-12-16 |
|
bpp-popgen
|
public |
Bio++ is a set of C++ libraries for Bioinformatics.
|
2024-12-16 |
|
perl-sanger-cgp-vagrent
|
public |
A toolset for comparing genomic variants to reference genome annotation to identify potential biological consequences.
|
2024-12-16 |
|
bioconductor-fenr
|
public |
Fast functional enrichment for interactive applications
|
2024-12-16 |
|
gmap
|
public |
Genomic mapping and alignment program for mRNA and EST sequences.
|
2024-12-16 |
|
biobambam
|
public |
Tools for early stage alignment file processing.
|
2024-12-16 |
|
bioconductor-ctdquerier
|
public |
Package for CTDbase data query, visualization and downstream analysis
|
2024-12-16 |
|
bioconductor-anvilworkflow
|
public |
Run workflows implemented in Terra/AnVIL workspace
|
2024-12-16 |
|
bioconductor-rpx
|
public |
R Interface to the ProteomeXchange Repository
|
2024-12-16 |
|
bioconductor-famagg
|
public |
Pedigree Analysis and Familial Aggregation
|
2024-12-16 |
|
bioconductor-anvilpublish
|
public |
Publish Packages and Other Resources to AnVIL Workspaces
|
2024-12-16 |
|
bioconductor-enmcb
|
public |
Predicting Disease Progression Based on Methylation Correlated Blocks using Ensemble Models
|
2024-12-16 |
|
bioconductor-ldblock
|
public |
data structures for linkage disequilibrium measures in populations
|
2024-12-16 |
|
dbg2olc
|
public |
Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies
|
2024-12-16 |
|
snvphyl-tools
|
public |
The SNVPhyl (Single Nucleotide Variant PHYLogenomics) pipeline is a pipeline for identifying
Single Nucleotide Variants (SNV) within a collection of microbial genomes and constructing a phylogenetic tree
|
2024-12-16 |
|
bioconductor-genproseq
|
public |
Generating Protein Sequences with Deep Generative Models
|
2024-12-16 |
|
addrg
|
public |
No Summary
|
2024-12-16 |
|
discosnp
|
public |
reference-free small variant caller for short read sequencing data
|
2024-12-16 |
|
bioconductor-browserviz
|
public |
BrowserViz: interactive R/browser graphics using websockets and JSON
|
2024-12-16 |
