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heliano
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public |
HELIANO: A fast and accurate tool for detection of Helitron-like elements
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2025-06-11 |
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genin2
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public |
Genin2 is a lightining-fast bioinformatic tool to predict genotypes for H5 viruses belonging to the European clade 2.3.4.4b.
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2025-06-11 |
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profile_dists
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public |
Profile Dists: Rapid calcualtion of allele profile distances and distance base querying
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2025-06-11 |
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bakrep-cli
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public |
BakRep-CLI: a commandline tool for the batch download of BakRep datasets
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2025-06-11 |
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genomad
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public |
Identification of mobile genetic elements.
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2025-06-11 |
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ciriquant
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public |
Circular RNA quantification pipeline.
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2025-06-10 |
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pgscatalog.match
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public |
Tools for matching variants in PGS scoring files and target variant information files.
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2025-06-10 |
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pgenlib
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public |
Python wrapper for pgenlib's basic reader and writer.
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2025-06-10 |
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tagger
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public |
tagger allows you to tag a corpus of documents with search terms that you provide. It is often used to find mentions of proteins, species, diseases, tissues, chemicals and drugs, GO terms, and so forth, in articles in the Medline corpus.
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2025-06-10 |
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gfftk
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public |
GFFtk: genome annotation GFF3 tool kit
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2025-06-10 |
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mapsplice
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public |
MapSplice is a software for mapping RNA-seq data to reference genome for splice junction discovery that depends only on reference genome, and not on any further annotations.
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2025-06-10 |
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r-cimpl
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public |
No Summary
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2025-06-10 |
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mykrobe
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public |
Antibiotic resistance prediction in minutes
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2025-06-10 |
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td2
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public |
TD2: a tool to find protein coding regions in transcripts.
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2025-06-09 |
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whatshap
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public |
Phase genomic variants using DNA sequencing reads (haplotype assembly).
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2025-06-09 |
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pyvcf3
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public |
A Variant Call Format reader for Python.
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2025-06-09 |
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r-mspbwt
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public |
Multi Symbol Positional Burrows Wheeler Transform
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2025-06-09 |
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beem-bio
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public |
Conversion of PDBx/mmCIF files to best effort/minimal PDB files.
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2025-06-09 |
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somaticseq
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public |
An ensemble approach to accurately detect somatic mutations.
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2025-06-09 |
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miniprot-boundary-scorer
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public |
Miniprot boundary scorer parses introns, starts, stops and exons from miniprot's alignment output and scores them.
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2025-06-08 |
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fastqtk
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public |
fastqtk is a fast and lightweight tool for interleaving/deinterleaving/counting/trimming FASTQ files.
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2025-06-08 |
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fastreer
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public |
Phylogenetic, distance, and tree-building utilities for VCF and FASTA files.
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2025-06-08 |
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r-diffcorr
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public |
A method for identifying pattern changes between 2 experimental conditions in correlation networks (e.g., gene co-expression networks), which builds on a commonly used association measure, such as Pearson's correlation coefficient. This package includes functions to calculate correlation matrices for high-dimensional dataset and to test differential correlation, which means the changes in the correlation relationship among variables (e.g., genes and metabolites) between 2 experimental conditions.
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2025-06-08 |
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phyloaln
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public |
PhyloAln: a reference-based multiple sequence alignment tool for phylogeny
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2025-06-08 |
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annosine2
|
public |
AnnoSINE_v2 - SINE Annotation Tool for Plant and Animal Genomes.
|
2025-06-08 |
