| Package Name | Access | Summary | Updated |
|---|---|---|---|
| tssv | public | Targeted characterisation of short structural variation. | 2025-06-24 |
| blobtk | public | Core functionality shared across BlobToolKit tools. | 2025-06-24 |
| mavis | public | A Structural Variant Post-Processing Package. | 2025-06-24 |
| remurna | public | No Summary | 2025-06-24 |
| deltapd | public | DeltaPD is a tool used to determine outliers in a gene tree when compared against a reference tree. | 2025-06-24 |
| tgtools | public | A command-line tool to help manipulate transjson files which are used to store transmission/relatedness networks. | 2025-06-24 |
| dialign2 | public | DIALIGN multiple sequence alignment using various sources of external information | 2025-06-24 |
| dnadotplot | public | DNA dot plot generator. | 2025-06-24 |
| riblast | public | RIblast is ultrafast RNA-RNA interaction prediction software. | 2025-06-24 |
| rfmix | public | RFMix implements a fast discriminative approach to modeling ancestry along an admixed chromosome given observed haplotype sequences of known or inferred ancestry. | 2025-06-24 |
| galaxy-job-config-init | public | Galaxy configuration. | 2025-06-24 |
| bio-ripser | public | Ripser: efficient computation of Vietoris–Rips persistence barcodes. | 2025-06-24 |
| submission-excel2xml | public | Generate DRA metadata XML files from Excel spreadsheet | 2025-06-23 |
| mimick | public | Simulate linked-read data | 2025-06-23 |
| bioconductor-scmet | public | Bayesian modelling of cell-to-cell DNA methylation heterogeneity | 2025-06-23 |
| perl-io-prompt | public | No Summary | 2025-06-23 |
| ucsc-gtftogenepred | public | Convert a GTF file to a genePred. | 2025-06-23 |
| r-quilt | public | Rapid and accurate genotype imputation from low coverage short read, long read, and cell free DNA sequence. | 2025-06-22 |
| fastlin | public | fastlin, ultra-fast MTBC lineage typing. | 2025-06-22 |
| ucsc-genepredtobed | public | Convert from genePred to bed format. Does not yet handle genePredExt. | 2025-06-22 |
| ucsc-pslcdnafilter | public | Filter cDNA alignments in psl format. Filtering criteria are comparative, selecting near best in genome alignments for each given cDNA and non-comparative, based only on the quality of an individual alignment. | 2025-06-22 |
| ucsc-blat | public | Standalone BLAT v. 39x1 fast sequence search command line tool. | 2025-06-22 |
| ucsc-bedtogenepred | public | Convert bed format files to genePred format. | 2025-06-22 |
| ucsc-liftover | public | Move annotations from one assembly to another. | 2025-06-22 |
| ucsc-stringify | public | Convert file to C strings. | 2025-06-21 |
