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bioconductor-bcrank
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public |
Predicting binding site consensus from ranked DNA sequences
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2024-12-19 |
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bioconductor-heatmaps
|
public |
Flexible Heatmaps for Functional Genomics and Sequence Features
|
2024-12-19 |
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bioconductor-decipher
|
public |
Tools for curating, analyzing, and manipulating biological sequences
|
2024-12-19 |
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bioconductor-cogeqc
|
public |
Systematic quality checks on comparative genomics analyses
|
2024-12-19 |
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bioconductor-cnvmetrics
|
public |
Copy Number Variant Metrics
|
2024-12-19 |
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bioconductor-biomartgogenesets
|
public |
Gene Ontology Gene Sets from BioMart
|
2024-12-19 |
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bioconductor-elmer.data
|
public |
Data for the ELMER package
|
2024-12-19 |
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bioconductor-gatefinder
|
public |
Projection-based Gating Strategy Optimization for Flow and Mass Cytometry
|
2024-12-19 |
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bioconductor-annotationfilter
|
public |
Facilities for Filtering Bioconductor Annotation Resources
|
2024-12-19 |
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bioconductor-cyanofilter
|
public |
Phytoplankton Population Identification using Cell Pigmentation and/or Complexity
|
2024-12-19 |
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bioconductor-pwmenrich
|
public |
PWM enrichment analysis
|
2024-12-19 |
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blockclust
|
public |
Efficient clustering and classification of non-coding RNAs from short read RNA-seq profiles.
|
2024-12-19 |
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bioconductor-msa
|
public |
Multiple Sequence Alignment
|
2024-12-19 |
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bioconductor-rnbeads.hg19
|
public |
RnBeads.hg19
|
2024-12-19 |
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bioconductor-rsweep
|
public |
Spaced Words Projection (SWeeP)
|
2024-12-19 |
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bioconductor-keggrest
|
public |
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
|
2024-12-19 |
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bioconductor-systempiperdata
|
public |
systemPipeRdata: Workflow templates and sample data
|
2024-12-19 |
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bioconductor-gtrellis
|
public |
Genome Level Trellis Layout
|
2024-12-19 |
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bioconductor-iwtomics
|
public |
Interval-Wise Testing for Omics Data
|
2024-12-19 |
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bioconductor-champdata
|
public |
Data Packages for ChAMP package
|
2024-12-19 |
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perl-datetime
|
public |
A date and time object for Perl
|
2024-12-19 |
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bioconductor-gcrma
|
public |
Background Adjustment Using Sequence Information
|
2024-12-19 |
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bioconductor-genomeintervals
|
public |
Operations on genomic intervals
|
2024-12-19 |
|
bioconductor-genomicdatacommons
|
public |
NIH / NCI Genomic Data Commons Access
|
2024-12-19 |
|
bioconductor-gdrstyle
|
public |
A package with style requirements for the gDR suite
|
2024-12-19 |
|
bioconductor-nanostringnctools
|
public |
NanoString nCounter Tools
|
2024-12-19 |
|
bioconductor-loci2path
|
public |
Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLs
|
2024-12-19 |
|
bioconductor-tfarm
|
public |
Transcription Factors Association Rules Miner
|
2024-12-19 |
|
bioconductor-target
|
public |
Predict Combined Function of Transcription Factors
|
2024-12-19 |
|
bioconductor-brain
|
public |
Baffling Recursive Algorithm for Isotope distributioN calculations
|
2024-12-19 |
|
fraggenescan
|
public |
FragGeneScan is an application for finding (fragmented) genes in short reads.
|
2024-12-19 |
|
cooltools
|
public |
Analysis tools for genomic interaction data stored in .cool format
|
2024-12-19 |
|
pairtools
|
public |
CLI tools to process mapped Hi-C data.
|
2024-12-19 |
|
r-quilt
|
public |
Rapid and accurate genotype imputation from low coverage short read, long read, and cell free DNA sequence.
|
2024-12-19 |
|
mgkit
|
public |
Metagenomics Framework
|
2024-12-19 |
|
tinker
|
public |
The Tinker molecular modeling software is a complete and general package for molecular mechanics and dynamics, with some special features for biopolymers
|
2024-12-19 |
|
amplicontyper
|
public |
Tool for training model and classifying reads from environmental ONT amplicon sequencing.
|
2024-12-19 |
|
mirscore
|
public |
miRScore: A rapid and precise microRNA validation tool
|
2024-12-19 |
|
bioconductor-clustall
|
public |
ClustAll: Data driven strategy to robustly identify stratification of patients within complex diseases
|
2024-12-19 |
|
bioconductor-bioccheck
|
public |
Bioconductor-specific package checks
|
2024-12-19 |
|
hostile
|
public |
Hostile: accurate host decontamination
|
2024-12-19 |
|
svtk
|
public |
Utilities for consolidating, filtering, resolving, and annotating structural variants.
|
2024-12-19 |
|
bioconductor-crimage
|
public |
CRImage a package to classify cells and calculate tumour cellularity
|
2024-12-19 |
|
r-deconcell
|
public |
DeconCell is an statitsical framework for generating cell proportions predictive models using bulk expresion data. It currently has pre-calculated models
|
2024-12-19 |
|
bioconductor-spectra
|
public |
Spectra Infrastructure for Mass Spectrometry Data
|
2024-12-19 |
|
bioconductor-pvca
|
public |
Principal Variance Component Analysis (PVCA)
|
2024-12-19 |
|
ntlink
|
public |
Genome assembly scaffolder using long reads and minimizers
|
2024-12-19 |
|
bioconductor-spia
|
public |
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
|
2024-12-19 |
|
r-nanostringnorm
|
public |
A set of tools for normalizing, diagnostics and visualization of NanoString nCounter data.
|
2024-12-19 |
|
bioconductor-cola
|
public |
A Framework for Consensus Partitioning
|
2024-12-19 |
