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bioconductor-tartare
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public |
Raw ground spectra recorded on Thermo Fisher Scientific mass spectrometers
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2024-12-22 |
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bioconductor-microbiotaprocess
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public |
A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework
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2024-12-22 |
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bioconductor-stexampledata
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public |
Collection of spatial transcriptomics datasets in SpatialExperiment Bioconductor format
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2024-12-22 |
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bioconductor-mwastools
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public |
MWASTools: an integrated pipeline to perform metabolome-wide association studies
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2024-12-22 |
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bioconductor-scale4c
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public |
Scale4C: an R/Bioconductor package for scale-space transformation of 4C-seq data
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2024-12-22 |
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bioconductor-ucell
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public |
Rank-based signature enrichment analysis for single-cell data
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2024-12-22 |
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bioconductor-pairadise
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public |
PAIRADISE: Paired analysis of differential isoform expression
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2024-12-22 |
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bioconductor-splicingfactory
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public |
Splicing Diversity Analysis for Transcriptome Data
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2024-12-22 |
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bioconductor-struct
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public |
Statistics in R Using Class-based Templates
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2024-12-22 |
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bioconductor-podkat
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public |
Position-Dependent Kernel Association Test
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2024-12-22 |
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bioconductor-diffcyt
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public |
Differential discovery in high-dimensional cytometry via high-resolution clustering
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2024-12-22 |
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bioconductor-spatialsimgp
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public |
Simulate Spatial Transcriptomics Data with the Mean-variance Relationship
|
2024-12-22 |
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bioconductor-escher
|
public |
Unified multi-dimensional visualizations with Gestalt principles
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2024-12-22 |
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bioconductor-marr
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public |
Maximum rank reproducibility
|
2024-12-22 |
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bioconductor-biocsklearn
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public |
interface to python sklearn via Rstudio reticulate
|
2024-12-22 |
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bioconductor-featseekr
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public |
FeatSeekR an R package for unsupervised feature selection
|
2024-12-22 |
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bioconductor-qmtools
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public |
Quantitative Metabolomics Data Processing Tools
|
2024-12-22 |
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bioconductor-divergence
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public |
Divergence: Functionality for assessing omics data by divergence with respect to a baseline
|
2024-12-22 |
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bioconductor-spasim
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public |
Spatial point data simulator for tissue images
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2024-12-22 |
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bioconductor-doser
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public |
doseR
|
2024-12-22 |
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bioconductor-spotclean
|
public |
SpotClean adjusts for spot swapping in spatial transcriptomics data
|
2024-12-22 |
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bioconductor-epistack
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public |
Heatmaps of Stack Profiles from Epigenetic Signals
|
2024-12-22 |
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bioconductor-ggspavis
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public |
Visualization functions for spatial transcriptomics data
|
2024-12-22 |
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bioconductor-ttmap
|
public |
Two-Tier Mapper: a clustering tool based on topological data analysis
|
2024-12-22 |
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r-rtassel
|
public |
R front-end for TASSEL
|
2024-12-22 |
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gtdbtk
|
public |
A toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
|
2024-12-22 |
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bioconductor-tpsvg
|
public |
Thin plate models to detect spatially variable genes
|
2024-12-22 |
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bioconductor-receptloss
|
public |
Unsupervised Identification of Genes with Expression Loss in Subsets of Tumors
|
2024-12-22 |
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bioconductor-stjoincount
|
public |
stJoincount - Join count statistic for quantifying spatial correlation between clusters
|
2024-12-22 |
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bioconductor-pharmacogx
|
public |
Analysis of Large-Scale Pharmacogenomic Data
|
2024-12-22 |
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bioconductor-proda
|
public |
Differential Abundance Analysis of Label-Free Mass Spectrometry Data
|
2024-12-22 |
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bioconductor-moleculeexperiment
|
public |
Prioritising a molecule-level storage of Spatial Transcriptomics Data
|
2024-12-22 |
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bioconductor-gdrcore
|
public |
Processing functions and interface to process and analyze drug dose-response data
|
2024-12-22 |
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bioconductor-limpca
|
public |
An R package for the linear modeling of high-dimensional designed data based on ASCA/APCA family of methods
|
2024-12-22 |
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bioconductor-sracipe
|
public |
Systems biology tool to simulate gene regulatory circuits
|
2024-12-22 |
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bioconductor-despace
|
public |
DESpace: a framework to discover spatially variable genes
|
2024-12-22 |
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bioconductor-sechm
|
public |
sechm: Complex Heatmaps from a SummarizedExperiment
|
2024-12-22 |
|
bioconductor-spatialde
|
public |
R wrapper for SpatialDE
|
2024-12-22 |
|
bioconductor-phosr
|
public |
A set of methods and tools for comprehensive analysis of phosphoproteomics data
|
2024-12-22 |
|
bioconductor-catscradle
|
public |
This package provides methods for analysing spatial transcriptomics data and for discovering gene clusters
|
2024-12-22 |
|
bioconductor-zfpkm
|
public |
A suite of functions to facilitate zFPKM transformations
|
2024-12-22 |
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bioconductor-rolde
|
public |
RolDE: Robust longitudinal Differential Expression
|
2024-12-22 |
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bioconductor-scider
|
public |
Spatial cell-type inter-correlation by density in R
|
2024-12-22 |
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bioconductor-sigfeature
|
public |
sigFeature: Significant feature selection using SVM-RFE & t-statistic
|
2024-12-22 |
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bioconductor-multibac
|
public |
Multiomic Batch effect Correction
|
2024-12-22 |
|
bioconductor-nnsvg
|
public |
Scalable identification of spatially variable genes in spatially-resolved transcriptomics data
|
2024-12-22 |
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bioconductor-runibic
|
public |
runibic: row-based biclustering algorithm for analysis of gene expression data in R
|
2024-12-22 |
|
bioconductor-lipidr
|
public |
Data Mining and Analysis of Lipidomics Datasets
|
2024-12-22 |
|
bioconductor-lefser
|
public |
R implementation of the LEfSE method for microbiome biomarker discovery
|
2024-12-22 |
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bioconductor-smoothclust
|
public |
smoothclust
|
2024-12-22 |
