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r-exomedepth
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public |
Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.
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2024-12-24 |
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bioconductor-crisprvariants
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public |
Tools for counting and visualising mutations in a target location
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2024-12-24 |
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bioconductor-prebs
|
public |
Probe region expression estimation for RNA-seq data for improved microarray comparability
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2024-12-24 |
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bioconductor-breakpointr
|
public |
Find breakpoints in Strand-seq data
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2024-12-24 |
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bioconductor-aneufinder
|
public |
Analysis of Copy Number Variation in Single-Cell-Sequencing Data
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2024-12-24 |
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bioconductor-mosaics
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public |
MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)
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2024-12-24 |
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bioconductor-qdnaseq.hg19
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public |
QDNAseq bin annotation for hg19
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2024-12-24 |
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bioconductor-cfdnakit
|
public |
Fragmen-length analysis package from high-throughput sequencing of cell-free DNA (cfDNA)
|
2024-12-24 |
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bioconductor-qdnaseq.mm10
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public |
Bin annotation mm10
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2024-12-24 |
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alevin-fry
|
public |
alevin-fry is a tool for the efficient processing of single-cell data based on RAD files produced by alevin
|
2024-12-24 |
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bioconductor-ace
|
public |
Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
|
2024-12-24 |
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bioconductor-genebreak
|
public |
Gene Break Detection
|
2024-12-24 |
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bioconductor-panelcn.mops
|
public |
CNV detection tool for targeted NGS panel data
|
2024-12-24 |
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bioconductor-variantexperiment
|
public |
A RangedSummarizedExperiment Container for VCF/GDS Data with GDS Backend
|
2024-12-24 |
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bioconductor-genesis
|
public |
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
|
2024-12-24 |
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bioconductor-trnadbimport
|
public |
Importing from tRNAdb and mitotRNAdb as GRanges objects
|
2024-12-24 |
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bioconductor-spatialdecon
|
public |
Deconvolution of mixed cells from spatial and/or bulk gene expression data
|
2024-12-24 |
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bioconductor-geodiff
|
public |
Count model based differential expression and normalization on GeoMx RNA data
|
2024-12-24 |
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bioconductor-affylmgui
|
public |
GUI for limma Package with Affymetrix Microarrays
|
2024-12-24 |
|
bioconductor-hgu133a2cdf
|
public |
A package containing an environment representing the HG-U133A_2.cdf file.
|
2024-12-24 |
|
bioconductor-poplarprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Poplar\_probe\_tab.
|
2024-12-24 |
|
bioconductor-hgu133plus2probe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U133\_Plus\_2\_probe\_tab.
|
2024-12-24 |
|
bioconductor-htrat230pmprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_Rat230\_PM\_probe\_tab.
|
2024-12-24 |
|
bioconductor-mirage
|
public |
MiRNA Ranking by Gene Expression
|
2024-12-24 |
|
bioconductor-moexexonprobesetlocation
|
public |
This package was automatically created by package AnnotationForge version 1.7.17. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible.
|
2024-12-24 |
|
bioconductor-mu11ksubbprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Mu11KsubB\_probe\_tab.
|
2024-12-24 |
|
bioconductor-htmg430aprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_MG-430A\_probe\_tab.
|
2024-12-24 |
|
bioconductor-xtropicaliscdf
|
public |
A package containing an environment representing the X_tropicalis.cdf file.
|
2024-12-24 |
|
bioconductor-htmg430acdf
|
public |
A package containing an environment representing the HT_MG-430A.cdf file.
|
2024-12-24 |
|
bioconductor-hgu133bprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U133B\_probe\_tab.
|
2024-12-24 |
|
bioconductor-canine.db0
|
public |
Base Level Annotation databases for canine
|
2024-12-24 |
|
bioconductor-ye6100subacdf
|
public |
A package containing an environment representing the Ye6100subA.CDF file.
|
2024-12-24 |
|
bioconductor-hgu133a2probe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U133A\_2\_probe\_tab.
|
2024-12-24 |
|
bioconductor-medicagoprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Medicago\_probe\_tab.
|
2024-12-24 |
|
bioconductor-mgu74cprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was MG-U74C\_probe\_tab.
|
2024-12-24 |
|
bioconductor-worm.db0
|
public |
Base Level Annotation databases for worm
|
2024-12-24 |
|
bioconductor-yeast.db0
|
public |
Base Level Annotation databases for yeast
|
2024-12-24 |
|
bioconductor-mirbase.db
|
public |
miRBase: the microRNA database assembled using data from miRBase (http://www.mirbase.org/).
|
2024-12-24 |
|
bioconductor-annotate
|
public |
Annotation for microarrays
|
2024-12-24 |
|
bioconductor-moe430bcdf
|
public |
A package containing an environment representing the MOE430B.CDF file.
|
2024-12-24 |
|
bioconductor-mirna10probe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was miRNA-1\_0\_probe\_tab.
|
2024-12-24 |
|
bioconductor-rat.db0
|
public |
Base Level Annotation databases for rat
|
2024-12-24 |
|
bioconductor-rae230bcdf
|
public |
A package containing an environment representing the RAE230B.CDF file.
|
2024-12-24 |
|
bioconductor-graphite
|
public |
GRAPH Interaction from pathway Topological Environment
|
2024-12-24 |
|
bioconductor-hcg110probe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HC-G110\_probe\_tab.
|
2024-12-24 |
|
bioconductor-hu35ksubdprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Hu35KsubD\_probe\_tab.
|
2024-12-24 |
|
bioconductor-hgu133bcdf
|
public |
A package containing an environment representing the HG-U133B.cdf file.
|
2024-12-24 |
|
bioconductor-mouse4302probe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Mouse430\_2\_probe\_tab.
|
2024-12-24 |
|
bioconductor-chickenprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Chicken\_probe\_tab.
|
2024-12-24 |
|
bioconductor-celegansprobe
|
public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was C\_elegans\_probe\_tab.
|
2024-12-24 |
