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Package Name Access Summary Updated
trinity public Trinity assembles transcript sequences from Illumina RNA-Seq data. 2024-12-26
bioconductor-hgu95d.db public Affymetrix Affymetrix HG U95D Array annotation data (chip hgu95d) 2024-12-26
bioconductor-hgu95c.db public Affymetrix Affymetrix HG U95C Array annotation data (chip hgu95c) 2024-12-26
r-acidsinglecell public Toolkit for single-cell RNA-seq analysis that extends the functionality of SingleCellExperiment. 2024-12-26
bioconductor-pocrcannotation.db public A package containing metadata for POCRC arrays assembled using data from public repositories 2024-12-26
bioconductor-operonhumanv3.db public FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3) assembled using data from public repositories 2024-12-26
r-bcbiobase public Base functions and generics for bcbio R packages. 2024-12-26
bioconductor-hthgu133plusa.db public Affymetrix Affymetrix HT_HG-U133_Plus_A Array annotation data (chip hthgu133plusa) 2024-12-26
bioconductor-tfhaz public Transcription Factor High Accumulation Zones 2024-12-26
bioconductor-hta20probeset.db public Affymetrix hta20 annotation data (chip hta20probeset) 2024-12-26
bioconductor-ribocrypt public Interactive visualization in genomics 2024-12-26
bioconductor-hgug4100a.db public Agilent Human 1 cDNA Microarray Kit annotation data (chip hgug4100a) assembled using data from public repositories 2024-12-26
iseq public iSeq is a Bash script that allows you to download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases. 2024-12-26
bioconductor-hgu133plus2.db public Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data (chip hgu133plus2) 2024-12-26
bioconductor-fraser public Find RAre Splicing Events in RNA-Seq Data 2024-12-26
bioconductor-hthgu133a.db public Affymetrix Affymetrix HT_HG-U133A Array annotation data (chip hthgu133a) 2024-12-26
bioconductor-saser public Scalable Aberrant Splicing and Expression Retrieval 2024-12-26
bioconductor-hugene21sttranscriptcluster.db public Affymetrix hugene21 annotation data (chip hugene21sttranscriptcluster) 2024-12-26
bioconductor-hu6800.db public Affymetrix Affymetrix Hu6800 Array annotation data (chip hu6800) 2024-12-26
bioconductor-rnamodr.ml public Detecting patterns of post-transcriptional modifications using machine learning 2024-12-26
bioconductor-lapointe.db public A package containing metadata for LAPOINTE arrays assembled using data from public repositories 2024-12-26
bioconductor-rnamodr.ribomethseq public Detection of 2'-O methylations by RiboMethSeq 2024-12-26
bioconductor-hthgu133b.db public Affymetrix Affymetrix HT_HG-U133B Array annotation data (chip hthgu133b) 2024-12-26
bioconductor-rnamodr.alkanilineseq public Detection of m7G, m3C and D modification by AlkAnilineSeq 2024-12-26
bioconductor-hgug4101a.db public Agilent Human 2 cDNA Microarry Kit annotation data (chip hgug4101a) assembled using data from public repositories 2024-12-26
bioconductor-lumihumanall.db public Illumina Human Illumina expression annotation data (chip lumiHumanAll) assembled using data from public repositories 2024-12-26
bioconductor-epivizrdata public Data Management API for epiviz interactive visualization app 2024-12-26
bioconductor-illuminahumanv4.db public Illumina HumanHT12v4 annotation data (chip illuminaHumanv4) assembled using data from public repositories 2024-12-26
bioconductor-nugohs1a520180.db public Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180) assembled using data from public repositories 2024-12-26
bioconductor-compepitools public Tools for computational epigenomics 2024-12-26
bioconductor-hgfocus.db public Affymetrix Affymetrix HG-Focus Array annotation data (chip hgfocus) 2024-12-26
bioconductor-listeretalbsseq public BS-seq data of H1 and IMR90 cell line excerpted from Lister et al. 2009 2024-12-26
bioconductor-hgu133a2.db public Affymetrix Affymetrix HG-U133A_2 Array annotation data (chip hgu133a2) 2024-12-26
bioconductor-extrachips public Additional functions for working with ChIP-Seq data 2024-12-26
bioconductor-clariomdhumanprobeset.db public Affymetrix clariomdhuman annotation data (chip clariomdhumanprobeset) 2024-12-26
bioconductor-hguatlas13k.db public Clontech BD Atlas Long Oligos Human 13K annotation data (chip hguatlas13k) assembled using data from public repositories 2024-12-26
bioconductor-hu35ksubc.db public Affymetrix Affymetrix Hu35KsubC Array annotation data (chip hu35ksubc) 2024-12-26
bioconductor-clariomdhumantranscriptcluster.db public Affymetrix clariomdhuman annotation data (chip clariomdhumantranscriptcluster) 2024-12-26
bioconductor-cocoa public Coordinate Covariation Analysis 2024-12-26
bioconductor-hgu95e.db public Affymetrix Affymetrix HG U95E Array annotation data (chip hgu95e) 2024-12-26
bioconductor-hta20transcriptcluster.db public Affymetrix hta20 annotation data (chip hta20transcriptcluster) 2024-12-26
bioconductor-methylsig public MethylSig: Differential Methylation Testing for WGBS and RRBS Data 2024-12-26
bioconductor-hgu95a.db public Affymetrix Affymetrix HG U95A Array annotation data (chip hgu95a) 2024-12-26
bioconductor-borealis public Bisulfite-seq OutlieR mEthylation At singLe-sIte reSolution 2024-12-26
bioconductor-hgu95av2.db public Affymetrix Affymetrix HG U95Av2 Array annotation data (chip hgu95av2) 2024-12-26
r-acidexperiment public Toolkit to extend the functionality of SummarizedExperiment. 2024-12-26
bioconductor-hgudkfz31.db public Unknown annotation data (chip hguDKFZ31) assembled using data from public repositories 2024-12-26
bioconductor-vtpnet public variant-transcription factor-phenotype networks 2024-12-26
bioconductor-norway981.db public Norway981 http://genome-www5.stanford.edu/ Annotation Data (Norway981) assembled using data from public repositories 2024-12-26
bioconductor-illuminahumanv2.db public Illumina HumanWG6v2 annotation data (chip illuminaHumanv2) assembled using data from public repositories 2024-12-26
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