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bioconda / packages

Package Name Access Summary Updated
bioconductor-martini public GWAS Incorporating Networks 2024-05-09
bioconductor-geneselectmmd public Gene selection based on the marginal distributions of gene profiles that characterized by a mixture of three-component multivariate distributions 2024-05-09
bioconductor-dirichletmultinomial public Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data 2024-05-09
bioconductor-methylmnm public detect different methylation level (DMR) 2024-05-09
bioconductor-maftools public Summarize, Analyze and Visualize MAF Files 2024-05-09
bioconductor-msstats public Protein Significance Analysis in DDA, SRM and DIA for Label-free or Label-based Proteomics Experiments 2024-05-09
bioconductor-rgraphviz public Provides plotting capabilities for R graph objects 2024-05-09
bioconductor-biocneighbors public Nearest Neighbor Detection for Bioconductor Packages 2024-05-09
bioconductor-affy public Methods for Affymetrix Oligonucleotide Arrays 2024-05-09
bioconductor-multtest public Resampling-based multiple hypothesis testing 2024-05-09
bioconductor-rbgl public An interface to the BOOST graph library 2024-05-09
bioconductor-acme public Algorithms for Calculating Microarray Enrichment (ACME) 2024-05-09
bioconductor-ebarrays public Unified Approach for Simultaneous Gene Clustering and Differential Expression Identification 2024-05-09
bioconductor-flowcore public flowCore: Basic structures for flow cytometry data 2024-05-09
bioconductor-cohcap public CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data 2024-05-09
bioconductor-mzr public parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data) 2024-05-09
bioconductor-pcamethods public A collection of PCA methods 2024-05-09
bioconductor-copa public Functions to perform cancer outlier profile analysis. 2024-05-09
bioconductor-bioqc public Detect tissue heterogeneity in expression profiles with gene sets 2024-05-09
bioconductor-graph public graph: A package to handle graph data structures 2024-05-08
bioconductor-affyio public Tools for parsing Affymetrix data files 2024-05-08
bioconductor-beclear public Correction of batch effects in DNA methylation data 2024-05-08
bioconductor-edger public Empirical Analysis of Digital Gene Expression Data in R 2024-05-08
bioconductor-bus public Gene network reconstruction 2024-05-08
bioconductor-fgsea public Fast Gene Set Enrichment Analysis 2024-05-08
bioconductor-cnanorm public A normalization method for Copy Number Aberration in cancer samples 2024-05-08
bioconductor-degseq public Identify Differentially Expressed Genes from RNA-seq data 2024-05-08
bioconductor-compass public Combinatorial Polyfunctionality Analysis of Single Cells 2024-05-08
bioconductor-snpstats public SnpMatrix and XSnpMatrix classes and methods 2024-05-08
bioconductor-snprelate public Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data 2024-05-08
bioconductor-cytolib public C++ infrastructure for representing and interacting with the gated cytometry data 2024-05-08
bioconductor-linnorm public Linear model and normality based normalization and transformation method (Linnorm) 2024-05-08
bioconductor-chemminer public Cheminformatics Toolkit for R 2024-05-08
bioconductor-mgsa public Model-based gene set analysis 2024-05-07
bioconductor-amountain public Active modules for multilayer weighted gene co-expression networks: a continuous optimization approach 2024-05-07
bioconductor-coregnet public CoRegNet : reconstruction and integrated analysis of co-regulatory networks 2024-05-07
bioconductor-genocn public genotyping and copy number study tools 2024-05-07
bioconductor-hmmcopy public Copy number prediction with correction for GC and mappability bias for HTS data 2024-05-07
bioconductor-geneticsped public Pedigree and genetic relationship functions 2024-05-07
bioconductor-affxparser public Affymetrix File Parsing SDK 2024-05-07
bioconductor-isolde public Integrative Statistics of alleLe Dependent Expression 2024-05-07
bioconductor-apeglm public Approximate posterior estimation for GLM coefficients 2024-05-06
bioconductor-genomicranges public Representation and manipulation of genomic intervals 2024-05-06
bioconductor-flowpeaks public An R package for flow data clustering 2024-05-06
bioconductor-gdsfmt public R Interface to CoreArray Genomic Data Structure (GDS) Files 2024-05-06
bioconductor-minet public Mutual Information NETworks 2024-05-06
bioconductor-rprotobuflib public C++ headers and static libraries of Protocol buffers 2024-05-06
bioconductor-massspecwavelet public Peak Detection for Mass Spectrometry data using wavelet-based algorithms 2024-05-06
bioconductor-roc public utilities for ROC, with microarray focus 2024-05-06
bioconductor-preprocesscore public A collection of pre-processing functions 2024-05-06

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