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bioconductor-smite
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public |
Significance-based Modules Integrating the Transcriptome and Epigenome
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2024-12-24 |
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bioconductor-scmap
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public |
A tool for unsupervised projection of single cell RNA-seq data
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2024-12-24 |
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bioconductor-goseq
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public |
Gene Ontology analyser for RNA-seq and other length biased data
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2024-12-24 |
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bioconductor-isee
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public |
Interactive SummarizedExperiment Explorer
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2024-12-24 |
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bioconductor-probamr
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public |
Generating SAM file for PSMs in shotgun proteomics data
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2024-12-24 |
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bioconductor-loomexperiment
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public |
LoomExperiment container
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2024-12-24 |
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bioconductor-baynorm
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public |
Single-cell RNA sequencing data normalization
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2024-12-24 |
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bioconductor-outrider
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public |
OUTRIDER - OUTlier in RNA-Seq fInDER
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2024-12-24 |
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bioconductor-scnorm
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public |
Normalization of single cell RNA-seq data
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2024-12-24 |
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bioconductor-switchde
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public |
Switch-like differential expression across single-cell trajectories
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2024-12-24 |
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bioconductor-recoup
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public |
An R package for the creation of complex genomic profile plots
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2024-12-24 |
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bioconductor-celltrails
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public |
Reconstruction, visualization and analysis of branching trajectories
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2024-12-24 |
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bioconductor-organismdbi
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public |
Software to enable the smooth interfacing of different database packages
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2024-12-24 |
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bioconductor-crlmm
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public |
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays
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2024-12-24 |
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bioconductor-mbpcr
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public |
Bayesian Piecewise Constant Regression for DNA copy number estimation
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2024-12-24 |
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bioconductor-genelendatabase
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public |
Lengths of mRNA transcripts for a number of genomes
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2024-12-24 |
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bioconductor-omicade4
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public |
Multiple co-inertia analysis of omics datasets
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2024-12-24 |
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bioconductor-mygene
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public |
Access MyGene.Info_ services
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2024-12-24 |
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bioconductor-hiccompare
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public |
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
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2024-12-24 |
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bioconductor-omicplotr
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public |
Visual Exploration of Omic Datasets Using a Shiny App
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2024-12-24 |
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bioconductor-baalchip
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public |
BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes
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2024-12-24 |
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bioconductor-mdts
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public |
Detection of de novo deletion in targeted sequencing trios
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2024-12-24 |
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bioconductor-basicstarrseq
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public |
Basic peak calling on STARR-seq data
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2024-12-24 |
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bioconductor-mgfr
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public |
Marker Gene Finder in RNA-seq data
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2024-12-24 |
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r-rapidr
|
public |
Package to perform non-invasive fetal testing for aneuploidies using sequencing count data from cell-free DNA
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2024-12-24 |
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bioconductor-pics
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public |
Probabilistic inference of ChIP-seq
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2024-12-24 |
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bioconductor-organism.dplyr
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public |
dplyr-based Access to Bioconductor Annotation Resources
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2024-12-24 |
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bioconductor-genomicfeatures
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public |
Query the gene models of a given organism/assembly
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2024-12-24 |
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bioconductor-tcseq
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public |
Time course sequencing data analysis
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2024-12-24 |
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r-exomedepth
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public |
Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.
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2024-12-24 |
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bioconductor-crisprvariants
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public |
Tools for counting and visualising mutations in a target location
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2024-12-24 |
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bioconductor-prebs
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public |
Probe region expression estimation for RNA-seq data for improved microarray comparability
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2024-12-24 |
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bioconductor-breakpointr
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public |
Find breakpoints in Strand-seq data
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2024-12-24 |
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bioconductor-aneufinder
|
public |
Analysis of Copy Number Variation in Single-Cell-Sequencing Data
|
2024-12-24 |
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bioconductor-mosaics
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public |
MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)
|
2024-12-24 |
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bioconductor-qdnaseq.hg19
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public |
QDNAseq bin annotation for hg19
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2024-12-24 |
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bioconductor-qdnaseq.mm10
|
public |
Bin annotation mm10
|
2024-12-24 |
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bioconductor-ace
|
public |
Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
|
2024-12-24 |
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bioconductor-genebreak
|
public |
Gene Break Detection
|
2024-12-24 |
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bioconductor-panelcn.mops
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public |
CNV detection tool for targeted NGS panel data
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2024-12-24 |
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bioconductor-genesis
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public |
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
|
2024-12-24 |
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bioconductor-trnadbimport
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public |
Importing from tRNAdb and mitotRNAdb as GRanges objects
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2024-12-24 |
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bioconductor-affylmgui
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public |
GUI for limma Package with Affymetrix Microarrays
|
2024-12-24 |
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bioconductor-hgu133a2cdf
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public |
A package containing an environment representing the HG-U133A_2.cdf file.
|
2024-12-24 |
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bioconductor-poplarprobe
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public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Poplar\_probe\_tab.
|
2024-12-24 |
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bioconductor-hgu133plus2probe
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public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HG-U133\_Plus\_2\_probe\_tab.
|
2024-12-24 |
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bioconductor-htrat230pmprobe
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public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_Rat230\_PM\_probe\_tab.
|
2024-12-24 |
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bioconductor-mirage
|
public |
MiRNA Ranking by Gene Expression
|
2024-12-24 |
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bioconductor-moexexonprobesetlocation
|
public |
This package was automatically created by package AnnotationForge version 1.7.17. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible.
|
2024-12-24 |
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bioconductor-mu11ksubbprobe
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public |
This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Mu11KsubB\_probe\_tab.
|
2024-12-24 |
