bioconda
by bioconda (Organization)
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile Conda package manager.
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To install packages from this channel, use the channel temporarily with conda or add it to your .condarc file for configured ongoing access. Learn more
- Temporary
- Configured
Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| snakemake-interface-report-plugins | 2.0.1 | This package provides a stable interface for interactions between Snakemake and its report plugins. | Mar 12, 2026 | MIT |
| rpsbproc | 0.5.1 | RpsbProc, the post-RPSBLAST Processing Utility. | Jan 30, 2026 | Public Domain |
| eva-sub-cli | 0.6.1 | EVA Submission Command Line Interface. | Mar 29, 2026 | Apache-2.0 |
| snakemake-interface-logger-plugins | 2.0.1 | This package provides a stable interface for interactions between Snakemake and its logger plugins. | Mar 22, 2026 | MIT |
| mtgrasp | 1.1.9 | reference-grade de novo animal mitochondrial genome assembly and standardization | Mar 29, 2026 | GPL-3.0-or-later |
| r-spacexr | 2.2.1 | Cell type identification and cell type-specific differential expression in spatial transcriptomics | Apr 22, 2025 | GPL-3.0-only |
| bioconductor-ucsc.utils | 1.6.1 | Low-level utilities to retrieve data from the UCSC Genome Browser | Feb 8, 2026 | Artistic-2.0 |
| met4j | 2.2.2 | Met4J is an open-source Java library dedicated to the structural analysis of metabolic networks | Jan 31, 2026 | CeCILL-2.1 |
| snakemake-interface-scheduler-plugins | 2.0.2 | This package provides a stable interface for interactions between Snakemake and its scheduler plugins. | Oct 23, 2025 | MIT |
| openstructure | 2.11.1 | Open-Source Computational Structural Biology Framework. | Aug 11, 2025 | LGPL-3.0-or-later |
| im2deep | 1.2.0 | Framework for prediction of collisional cross-section of peptides. | Jan 11, 2026 | Apache-2.0 |
| orthanq | 1.21.0 | Uncertainty aware HLA typing and general haplotype quantification. | Feb 12, 2026 | MIT |
| perl-http-cookiejar-lwp | 0.014 | A minimalist HTTP user agent cookie jar. | Aug 15, 2025 | Apache-2.0 |
| heasoft | 6.35.2 | NASA High Energy Astrophysics Software (HEAsoft) | Aug 19, 2025 | Clear BSD License |
| dampa | 0.2.0 | DAMPA designs probes for use in targetted metagenomics. It leverages pangenome graphs to increase speed and accuracy. | Nov 14, 2025 | MIT |
| coot-headless | 1.2 | Coot Headless API - Software for macromolecular model building. | Apr 2, 2026 | GPL-3.0-or-later AND LGPL-3.0-or-later |
| pathogen-embed | 3.1.0 | Create reduced dimension embeddings for pathogen sequences | Apr 22, 2025 | MIT |
| pilea | 1.3.8 | Pilea: profiling bacterial growth dynamics from metagenomes with sketching | Mar 3, 2026 | MIT |
| syny | 1.3.2 | Genome collinearity inferences | Feb 11, 2026 | MIT |
| rnanorm | 2.2.0 | Common RNA-seq normalization methods | Apr 22, 2025 | Apache-2.0 |
| epimetheus-py | 0.7.9 | CLI tool for fast lookup in pileup for motif methylation. | Mar 20, 2026 | MIT |
| pyjess | 0.9.1 | Cython bindings and Python interface to JESS, a 3D template matching software. | Dec 25, 2025 | MIT |
| perl-alien-build-plugin-download-gitlab | 0.01 | Alien::Build plugin to download from GitLab | Jun 18, 2025 | Perl_5 |
| pybwa | 2.2.0 | Pybwa is a python module that makes it easy to align sequence data. It is a lightweight wrapper of bwa. | Sep 26, 2025 | MIT |
| libgff | 2.0.1 | A simple "libraryfication" of the GFF/GTF parsing code that is used in GFFRead codebase. | Mar 6, 2026 | MIT |