bioconda
by bioconda (Organization)
Bioconda is a distribution of bioinformatics software realized as a channel for the versatile Conda package manager.
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To install packages from this channel, use the channel temporarily with conda or add it to your .condarc file for configured ongoing access. Learn more
- Temporary
- Configured
Packages
| Name | Latest Version | Summary | Updated | License |
|---|
| upload-test-deea489f | — | Jun 16, 2023 | — | |
| upload-test-6021beed | 0.1 | — | Jun 16, 2023 | — |
| upload-test-e3bc618b | — | Jun 16, 2023 | — | |
| upload-test-255a6ccb | 0.1 | — | Jun 16, 2023 | — |
| upload-test-cd8dd44b | — | Jun 16, 2023 | — | |
| upload-test-db0f71c3 | — | Jun 16, 2023 | — | |
| upload-test-d311ee31 | — | Jun 16, 2023 | — | |
| fastqc | 0.12.1 | A quality control tool for high throughput sequence data. | Apr 22, 2025 | GPL >=3 |
| cufflinks | 2.2.1 | Transcriptome assembly and differential expression analysis for RNA-Seq. | Apr 22, 2025 | Boost Software License |
| perl-db-file | 1.855 | Perl5 access to Berkeley DB version 1.x. | Apr 22, 2025 | perl_5 |
| pybedtools | 0.12.0 | Wraps BEDTools for use in Python and adds many additional features. | Apr 22, 2025 | MIT |
| bedtools | 2.31.1 | A powerful toolset for genome arithmetic | Apr 22, 2025 | MIT |
| julia | 0.5.2 | A high-performance dynamic programming language for data science | Apr 22, 2025 | MIT |
| picard | 3.4.0 | Java tools for working with NGS data in the BAM format | Apr 22, 2025 | MIT |
| wham | 1.8.0 | Structural variant detection and association testing | Apr 22, 2025 | MIT |
| urllib3 | 1.12 | HTTP library with thread-safe connection pooling, file post, and more. | Apr 22, 2025 | MIT License |
| sure | 2.0.1 | utility belt for automated testing in python for python | Apr 22, 2025 | GNU General Public License v3 or later (GPLv3+) |
| xmltodict | 0.9.2 | Makes working with XML feel like you are working with JSON | Apr 22, 2025 | MIT License |
| httpretty | 0.8.10 | HTTP client mock for Python | Apr 22, 2025 | MIT License |
| yaggo | 1.5.10 | Yaggo is a tool to generate command line parsers for C++. Yaggo stands for "Yet Another GenGetOpt" and is inspired by GNU Gengetopt. | Apr 22, 2025 | GPL-3.0 |
| bioconductor-zlibbioc | 1.52.0 | An R packaged zlib-1.2.5 | Apr 22, 2025 | Artistic-2.0 + file LICENSE |
| r-snow | 0.4_1 | Support for simple parallel computing in R. | Apr 22, 2025 | GPL |
| ruby | 2.2.3 | — | Apr 22, 2025 | BSD |
| jellyfish | 2.2.10 | Jellyfish is a tool for fast, memory-efficient counting of k-mers in DNA. A k-mer is a substring of length k, and counting the occurrences of all such substrings is a central step in many analyses of DNA sequence | Apr 22, 2025 | GPL-3.0 |
| r-futile.options | 1.0.0 | A scoped options management framework | Apr 22, 2025 | LGPL-3 |