| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-mirintegrator | public | Integrating microRNA expression into signaling pathways for pathway analysis | 2025-04-22 |
| bioconductor-mirbaseversions.db | public | Annotation package containing all available miRNA names from 22 versions (data from http://www.mirbase.org/). | 2025-04-22 |
| bioconductor-dexus | public | DEXUS - Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions or without Replicates | 2025-04-22 |
| bioconductor-dfp | public | Gene Selection | 2025-04-22 |
| bioconductor-diffgeneanalysis | public | Performs differential gene expression Analysis | 2025-04-22 |
| bioconductor-diffloop | public | Identifying differential DNA loops from chromatin topology data | 2025-04-22 |
| bioconductor-easyrnaseq | public | Count summarization and normalization for RNA-Seq data | 2025-04-22 |
| bioconductor-director | public | A dynamic visualization tool of multi-level data | 2025-04-22 |
| bioconductor-msnid | public | Utilities for Exploration and Assessment of Confidence of LC-MSn Proteomics Identifications | 2025-04-22 |
| bioconductor-epivizrstandalone | public | Run Epiviz Interactive Genomic Data Visualization App within R | 2025-04-22 |
| bioconductor-edda | public | Experimental Design in Differential Abundance analysis | 2025-04-22 |
| bioconductor-mqtl.nmr | public | mQTL.NMR provides a complete mQTL analysis pipeline for 1H NMR data. Distinctive features include normalisation using most-used approaches, peak alignment using RSPA approach, dimensionality reduction using SRV and binning approaches, and mQTL analysis for animal and human cohorts. | 2025-04-22 |
| bioconductor-epivizr | public | R Interface to epiviz web app | 2025-04-22 |
| bioconductor-encodexplorer | public | A compilation of ENCODE metadata | 2025-04-22 |
| bioconductor-empiricalbrownsmethod | public | Uses Brown's method to combine p-values from dependent tests | 2025-04-22 |
| bioconductor-biocgraph | public | Graph examples and use cases in Bioinformatics | 2025-04-22 |
| bioconductor-epivizrdata | public | Data Management API for epiviz interactive visualization app | 2025-04-22 |
| bioconductor-multiclust | public | multiClust: An R-package for Identifying Biologically Relevant Clusters in Cancer Transcriptome Profiles | 2025-04-22 |
| bioconductor-epigenomix | public | Epigenetic and gene transcription data normalization and integration with mixture models | 2025-04-22 |
| bioconductor-multiassayexperiment | public | Software for the integration of multi-omics experiments in Bioconductor | 2025-04-22 |
| bioconductor-ctc | public | Cluster and Tree Conversion. | 2025-04-22 |
| bioconductor-epivizrserver | public | WebSocket server infrastructure for epivizr apps and packages | 2025-04-22 |
| bioconductor-eudysbiome | public | Cartesian plot and contingency test on 16S Microbial data | 2025-04-22 |
| bioconductor-esetvis | public | Visualizations of expressionSet Bioconductor object | 2025-04-22 |
| bioconductor-eximir | public | R functions for the normalization of Exiqon miRNA array data | 2025-04-22 |
