| Package Name | Access | Summary | Updated |
|---|---|---|---|
| r-d3heatmap | public | No Summary | 2025-04-22 |
| r-shinyace | public | No Summary | 2025-04-22 |
| mobster | public | NGS tool for detecting MEI and gene retrotransposition events in WGS and WES data, see Thung et al. Genome Biol. 2014 for more information. | 2025-04-22 |
| perl-tie-hash-indexed | public | Ordered hashes for Perl | 2025-04-22 |
| music | public | No Summary | 2025-04-22 |
| seq-gen | public | Seq-Gen is a program that will simulate the evolution of nucleotide or amino acid sequences along a phylogeny, using common models of the substitution process. | 2025-04-22 |
| riboplot | public | No Summary | 2025-04-22 |
| garnet | public | UNKNOWN | 2025-04-22 |
| bioconductor-massspecwavelet | public | Peak Detection for Mass Spectrometry data using wavelet-based algorithms | 2025-04-22 |
| r-rann | public | No Summary | 2025-04-22 |
| r-waveslim | public | No Summary | 2025-04-22 |
| obitools | public | The OBITools package is a set of programs specifically designed for analyzing NGS data in a DNA metabarcoding context, taking into account taxonomic information | 2025-04-22 |
| ddrage | public | Simulator for ddRADseq (double digest restriction site associated DNA sequencing) datasets. Generates reads (FASTQ format) that can be analyzed and validated using a ground truth file (YAML). | 2025-04-22 |
| pymot | public | No Summary | 2025-04-22 |
| munkres | public | No Summary | 2025-04-22 |
| python-omero | public | Client library offering helper methods to access an OMERO server. | 2025-04-22 |
| zeroc-ice | public | Ice is a comprehensive RPC framework that helps you network your software with minimal effort. | 2025-04-22 |
| ibdne | public | No Summary | 2025-04-22 |
| ibdseq | public | No Summary | 2025-04-22 |
| plastid | public | plastid is a Python library for genomic analysis -- in particular, high-throughput sequencing data | 2025-04-22 |
| metavelvet-sl-pipeline | public | No Summary | 2025-04-22 |
| jaffa | public | JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts then searches for gene fusions. This package contains the wrappers jaffa-direct, jaffa-assembly, and jaffa-hybrid. You can pass the "refSeq" parameter in the environment variables JAFFA_REF_BASE. Otherwise, pass any paramters to the wrappers as you would to the bpipe JAFFA_{method} call in the manual. | 2025-04-22 |
| probamconvert | public | proBAMconvert is a conversion tool to convert common peptide identification files (mzIdentML, pepXML, mzTAB) to the proBAM or proBED format | 2025-04-22 |
| perl-list-compare | public | No Summary | 2025-04-22 |
| perl-sub-name | public | No Summary | 2025-04-22 |
