| Package Name | Access | Summary | Updated |
|---|---|---|---|
| r-mixtools | public | No Summary | 2025-04-22 |
| r-segmented | public | No Summary | 2025-04-22 |
| sevenbridges-python | public | SBG API python client bindings | 2025-04-22 |
| velvet-sc | public | No Summary | 2025-04-22 |
| stringmlst | public | Fast k-mer based tool for multi locus sequence typing (MLST) directly from genome sequencing reads | 2025-04-22 |
| ale | public | ALE: Assembly Likelihood Estimator | 2025-04-22 |
| rnftools | public | RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data. | 2025-04-22 |
| pydna | public | Representing double stranded DNA and functions for simulating cloning and homologous recombination between DNA molecules. | 2025-04-22 |
| pymix | public | No Summary | 2025-04-22 |
| r-rubic | public | No Summary | 2025-04-22 |
| r-gdtools | public | No Summary | 2025-04-22 |
| curesim | public | No Summary | 2025-04-22 |
| starseqr | public | RNA Fusion Detection and Quantification | 2025-04-22 |
| rabix-bunny | public | Open-source development kit for the Common Workflow Language from Seven Bridges. The Rabix executor Bunny, which can be used to execute apps locally from the command line. | 2025-04-22 |
| gffread | public | GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more. | 2025-04-22 |
| spingo | public | No Summary | 2025-04-22 |
| r-fnn | public | No Summary | 2025-04-22 |
| bioconductor-ipo | public | Automated Optimization of XCMS Data Processing parameters | 2025-04-22 |
| mgs-canopy | public | No Summary | 2025-04-22 |
| r-speaq | public | Makes Nuclear Magnetic Resonance spectroscopy (NMR spectroscopy) data analysis as easy as possible by only requiring a small set of functions to perform an entire analysis. 'speaq' offers the possibility of raw spectra alignment and quantitation but also an analysis based on features whereby the spectra are converted to peaks which are then grouped and turned into features. These features can be processed with any number of statistical tools either included in 'speaq' or available elsewhere on CRAN. More detail can be found in Vu et al. (2011) <doi:10.1186/1471-2105-12-405> and Beirnaert et al. (2018) <doi:10.1371/journal.pcbi.1006018>. | 2025-04-22 |
| fwdpy11 | public | Forward-time population genetic simulation in Python. | 2025-04-22 |
| shapemapper | public | No Summary | 2025-04-22 |
| ray | public | No Summary | 2025-04-22 |
| ghmm | public | No Summary | 2025-04-22 |
| graftm | public | GraftM is a pipeline used for identifying and classifying marker gene reads from metagenomic datasets | 2025-04-22 |
