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snakemake-minimal
|
public |
A popular workflow management system aiming at full in-silico reproducibility.
|
2025-03-28 |
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snippy
|
public |
Rapid bacterial SNP calling and core genome alignments
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2025-03-26 |
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svtopovz
|
public |
Complex structural variant visualization for HiFi sequencing data: plotting tool.
|
2025-03-25 |
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r-spacexr
|
public |
Cell type identification and cell type-specific differential expression in spatial transcriptomics
|
2025-03-25 |
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hmftools-virus-interpreter
|
public |
Post-process VIRUSBreakend summary results.
|
2025-03-25 |
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gtotree
|
public |
GToTree is a user-friendly workflow for phylogenomics.
|
2025-03-25 |
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bioconductor-data-packages
|
public |
A package to enable downloading and installation of Bioconductor data packages
|
2025-03-25 |
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ngscheckmate
|
public |
Software package for identifying next generation sequencing (NGS) data files from the same individual.
|
2025-03-25 |
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snakedeploy
|
public |
Helper for deploying published Snakemake pipelines.
|
2025-03-25 |
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dipcall
|
public |
Dipcall is a reference-based variant calling pipeline for a pair of phased haplotype assemblies.
|
2025-03-25 |
|
libmaus2
|
public |
Collection of data structures and algorithms for NGS data.
|
2025-03-25 |
|
gunc
|
public |
Python package for detection of chimerism and contamination in prokaryotic genomes.
|
2025-03-25 |
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raptor
|
public |
Raptor: A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
|
2025-03-25 |
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nanocompore
|
public |
Nanocompore identifies raw signal changes between two conditions dRNA-Seq data.
|
2025-03-25 |
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openduck
|
public |
Open source library for dynamic undocking (DUck)
|
2025-03-25 |
|
flair
|
public |
Correction, isoform definition, and alternative splicing analysis of noisy reads (ONT and PacBio).
|
2025-03-25 |
|
r-sceasy
|
public |
A package providing functions to convert between different single-cell data formats.
|
2025-03-25 |
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altamisa
|
public |
Alternative Python API for accessing ISA-tab files.
|
2025-03-25 |
|
scanpy-scripts
|
public |
Scripts for using scanpy from the command line
|
2025-03-25 |
|
arb-bio-devel
|
public |
ARB 6 Sequence Analysis Suite
|
2025-03-25 |
|
arb-bio-tools
|
public |
ARB 6 Sequence Analysis Suite
|
2025-03-25 |
|
libarbdb
|
public |
ARB 6 Sequence Analysis Suite
|
2025-03-25 |
|
perl-math-random-mt-auto
|
public |
Auto-seeded Mersenne Twister PRNGs
|
2025-03-25 |
|
perl-unicode-utf8
|
public |
Encoding and decoding of UTF-8 encoding form
|
2025-03-25 |
|
pbmm2
|
public |
A minimap2 frontend for PacBio native data formats
|
2025-03-25 |
