|
meryl
|
public |
No Summary
|
2025-04-22 |
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perl-perlio-utf8_strict
|
public |
Fast and correct UTF-8 IO
|
2025-04-22 |
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nspdk
|
public |
No Summary
|
2025-04-22 |
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genomicconsensus
|
public |
No Summary
|
2025-04-22 |
|
genometools-genometools
|
public |
GenomeTools genome analysis system.
|
2025-04-22 |
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blasr
|
public |
No Summary
|
2025-04-22 |
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treetime
|
public |
Maximum-Likelihood dating and ancestral inference for phylogenetic trees
|
2025-04-22 |
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perl-module-build-tiny
|
public |
A tiny replacement for Module::Build
|
2025-04-22 |
|
umi_tools
|
public |
Tools for dealing with Unique Molecular Identifiers (UMIs) / Random Molecular Tags (RMTs).
|
2025-04-22 |
|
ruamel.yaml
|
public |
A YAML package for Python. It is a derivative of Kirill Simonov's PyYAML 3.11 which supports YAML1.1
|
2025-04-22 |
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circos
|
public |
Circos is a software package for visualizing data and information. It visualizes data in a circular layout
|
2025-04-22 |
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perl-params-validate
|
public |
Validate method/function parameters
|
2025-04-22 |
|
perl-html-parser
|
public |
HTML parser class
|
2025-04-22 |
|
sed
|
public |
sed (stream editor)
|
2025-04-22 |
|
busco
|
public |
Assessment of assembly completeness using Universal Single Copy Orthologs.
|
2025-04-22 |
|
r-fdrtool
|
public |
Estimates both tail area-based false discovery rates (Fdr) as well as local false discovery rates (fdr) for a variety of null models (p-values, z-scores, correlation coefficients, t-scores). The proportion of null values and the parameters of the null distribution are adaptively estimated from the data. In addition, the package contains functions for non-parametric density estimation (Grenander estimator), for monotone regression (isotonic regression and antitonic regression with weights), for computing the greatest convex minorant (GCM) and the least concave majorant (LCM), for the half-normal and correlation distributions, and for computing empirical higher criticism (HC) scores and the corresponding decision threshold.
|
2025-04-22 |
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perl-text-soundex
|
public |
Implementation of the soundex algorithm.
|
2025-04-22 |
|
rmblast
|
public |
RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST+ suite.
|
2025-04-22 |
|
hicexplorer
|
public |
Set of programs to process, analyze and visualize Hi-C and capture Hi-C data
|
2025-04-22 |
|
bioconductor-mzr
|
public |
parser for netCDF, mzXML and mzML and mzIdentML files (mass spectrometry data)
|
2025-04-22 |
|
gawk
|
public |
GNU awk
|
2025-04-22 |
|
poretools
|
public |
poretools: a toolkit for working with nanopore sequencing data from Oxford Nanopore
|
2025-04-22 |
|
deeptools
|
public |
A set of user-friendly tools for normalization and visualzation of deep-sequencing data
|
2025-04-22 |
|
snippy
|
public |
Rapid bacterial SNP calling and core genome alignments
|
2025-04-22 |
|
libmagic
|
public |
Implementation of the file(1) command
|
2025-04-22 |
