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psauron
|
public |
PSAURON: a machine learning model for rapid assessment of protein coding gene annotation
|
2025-04-22 |
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fastcov
|
public |
This package installs fastcov and all it's dependencies. fastcov is used to plot coverage plots based on BAM files.
|
2025-04-22 |
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alientrimmer
|
public |
Tool for trimming non-confident bases and alien oligo-nucleotide sequences from sequencing reads.
|
2025-04-22 |
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spacedust
|
public |
De novo discovery of conserved gene clusters in microbial genomes with Spacedust
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2025-04-22 |
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vcf_parser
|
public |
Small library for parsing vcf files.
|
2025-04-22 |
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snakemake-executor-plugin-aws-batch
|
public |
A Snakemake executor plugin for submitting jobs to AWS Batch.
|
2025-04-22 |
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cctyper
|
public |
CRISPRCasTyper: Automatic detection and subtyping of CRISPR-Cas operons
|
2025-04-22 |
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snakemake-storage-plugin-xrootd
|
public |
A Snakemake storage plugin for XRootD storage
|
2025-04-22 |
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mutserve
|
public |
Mutserve2 is a variant caller for the mitochondrial genome to detect homoplasmic and heteroplasmic sites in sequence data.
|
2025-04-22 |
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hippunfold-dev
|
public |
Meta-package that installs hippunfold with development dependencies.
|
2025-04-22 |
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formulaic-contrasts
|
public |
Build contrasts for models defined with formulaic
|
2025-04-22 |
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rabbitsketch
|
public |
RabbitSketch is a highly optimized sketching library that exploits the power of modern multi-core CPUs.
|
2025-04-22 |
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hippunfold
|
public |
This tool aims to automatically model the topological folding
structure of the human hippocampus, and computationally unfold it.
|
2025-04-22 |
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jacusa2
|
public |
JACUSA2 is a framework for accurate variant assessment, detecting SNVs and arrest events in NGS data.
|
2025-04-22 |
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aliview
|
public |
AliView is an intuitive and fast alignment viewer and editor for DNA and amino acid sequences.
|
2025-04-22 |
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metafun
|
public |
Custom package for metafun workflow management
|
2025-04-22 |
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postmaster
|
public |
Postmaster is a tool for annotating transcriptome alignments with posterior alignment probabilities derived from salmon quantifications.
|
2025-04-22 |
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danbing-tk
|
public |
Toolkit for VNTR genotyping and repeat-pan genome graph construction
|
2025-04-22 |
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r-psminer
|
public |
Utilities for interacting with the pathogensurveillance pipeline.
|
2025-04-22 |
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te-aid
|
public |
Annotation helper tool for the manual curation of transposable element consensus sequences
|
2025-04-22 |
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lassaseq
|
public |
Tool for downloading Lassa virus sequences
|
2025-04-22 |
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enviroampdesigner
|
public |
Tool for training model and classifying reads from environmental ONT amplicon sequencing.
|
2025-04-22 |
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snakemake-storage-plugin-sharepoint
|
public |
Snakemake storage plugin for reading and writing files on Microsoft SharePoint.
|
2025-04-22 |
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cayman
|
public |
A command-line profiling tool for profiling CAZyme abundances in metagenomic datasets.
|
2025-04-22 |
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pvga
|
public |
PVGA is a powerful virus-focused assembler that does both assembly and polishing.
|
2025-04-22 |
