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esme_pnetcdf_mvapich_4_0_ucx
|
public |
PnetCDF - Parallel netCDF
|
2025-08-13 |
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esme_pio_mvapich_4_0_ucx
|
public |
ParallelIO - High-level parallel I/O library
|
2025-08-13 |
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esme_netcdf-fortran_mvapich_4_0_ucx
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-08-13 |
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esme_esmf_mvapich_4_0_ucx
|
public |
ESMF - Earth System Modeling Framework
|
2025-08-13 |
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skani
|
public |
skani is a fast and robust tool for calculating ANI between metagenome assembled genomes and contigs.
|
2025-08-13 |
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distree
|
public |
A tool to calculate distances between phylogenetic trees.
|
2025-08-12 |
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ddprimer
|
public |
Pipeline for designing primers optimized for droplet digital PCR
|
2025-08-12 |
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ddquint
|
public |
Droplet Digital PCR Multiplex Analysis for chromosomal copy number detection
|
2025-08-12 |
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longcalld
|
public |
longcallD: local-haplotagging-based small and structural variant calling
|
2025-08-12 |
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fstic
|
public |
High-performance Rust tool for computing multiple genetic distance metrics (FST, GST, Jost’s D, etc.) from VCFs or allele-frequency tables, with parallel processing and advanced filtering.
|
2025-08-12 |
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bioconductor-survcomp
|
public |
Performance Assessment and Comparison for Survival Analysis
|
2025-08-12 |
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pbsim3
|
public |
A simulator for all types of Pacific Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) long reads
|
2025-08-12 |
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riassigner
|
public |
GC-MS retention index calculation
|
2025-08-12 |
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virheat
|
public |
Visualize microbial evolution at the SNP level by creating a heatmap from vcf files.
|
2025-08-12 |
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t-coffee
|
public |
A collection of tools for Multiple Alignments of DNA, RNA, Protein Sequence
|
2025-08-12 |
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ligand-validation
|
public |
Extract ligand and binding site information from PDB X-ray validation reports
|
2025-08-12 |
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phylip
|
public |
Package of programs for inferring phylogenies
|
2025-08-12 |
|
mycotools
|
public |
Comparative genomics automation and standardization software.
|
2025-08-12 |
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gustaf
|
public |
Gustaf is a tool primarily designed for multi-split mapping of sequencing reads.
|
2025-08-12 |
|
methpipe
|
public |
A pipeline for analyzing DNA methylation data from bisulfite sequencing.
|
2025-08-11 |
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kraken-ea
|
public |
Kraken is a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies. This is a modified version allowing for splitting of fastq files based on read classifications.
|
2025-08-11 |
|
fgpyo
|
public |
Python bioinformatics and genomics library
|
2025-08-11 |
|
bigslice
|
public |
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data.
|
2025-08-11 |
|
bioconductor-dreamlet
|
public |
Cohort-scale differential expression analysis of single cell data using linear (mixed) models
|
2025-08-11 |
|
unifire
|
public |
UniFIRE is the official protein annotator from Uniprot. It runs both UniRule and ARBA to assign protein function.
|
2025-08-11 |
