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bioconductor-ebcoexpress
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public |
EBcoexpress for Differential Co-Expression Analysis
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2024-12-18 |
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r-aroma.affymetrix
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public |
A cross-platform R framework that facilitates processing of any number of Affymetrix microarray samples regardless of computer system. The only parameter that limits the number of chips that can be processed is the amount of available disk space. The Aroma Framework has successfully been used in studies to process tens of thousands of arrays. This package has actively been used since 2006.
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2024-12-18 |
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bioconductor-healthyflowdata
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public |
Healthy dataset used by the flowMatch package
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2024-12-18 |
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bioconductor-genetclassifier
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public |
Classify diseases and build associated gene networks using gene expression profiles
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2024-12-18 |
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bioconductor-orderedlist
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public |
Similarities of Ordered Gene Lists
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2024-12-18 |
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bioconductor-pvac
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public |
PCA-based gene filtering for Affymetrix arrays
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2024-12-18 |
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bioconductor-siggenes
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public |
Multiple Testing using SAM and Efron's Empirical Bayes Approaches
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2024-12-18 |
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bioconductor-qpcrnorm
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public |
Data-driven normalization strategies for high-throughput qPCR data.
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2024-12-18 |
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bioconductor-kegggraph
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public |
KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor
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2024-12-18 |
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bioconductor-geosubmission
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public |
Prepares microarray data for submission to GEO
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2024-12-18 |
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bioconductor-diggit
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public |
Inference of Genetic Variants Driving Cellular Phenotypes
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2024-12-18 |
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bioconductor-gaga
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public |
GaGa hierarchical model for high-throughput data analysis
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2024-12-18 |
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bioconductor-bronchialil13
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public |
time course experiment involving il13
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2024-12-18 |
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bioconductor-affyrnadegradation
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public |
Analyze and correct probe positional bias in microarray data due to RNA degradation
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2024-12-18 |
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bioconductor-ocplus
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public |
Operating characteristics plus sample size and local fdr for microarray experiments
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2024-12-18 |
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bioconductor-sconify
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public |
A toolkit for performing KNN-based statistics for flow and mass cytometry data
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2024-12-18 |
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bioconductor-biomvcclass
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public |
Model-View-Controller (MVC) Classes That Use Biobase
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2024-12-18 |
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r-structssi
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public |
Performs multiple testing corrections that take specific structure of hypotheses into account.
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2024-12-18 |
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bioconductor-flowai
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public |
Automatic and interactive quality control for flow cytometry data
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2024-12-18 |
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bioconductor-deconrnaseq
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public |
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data
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2024-12-18 |
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bioconductor-affycompdata
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public |
affycomp data
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2024-12-18 |
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bioconductor-matter
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public |
Out-of-core statistical computing and signal processing
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2024-12-18 |
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bioconductor-mzid
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public |
An mzIdentML parser for R
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2024-12-18 |
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bioconductor-protgenerics
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public |
Generic infrastructure for Bioconductor mass spectrometry packages
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2024-12-18 |
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bioconductor-seqtools
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public |
Analysis of nucleotide, sequence and quality content on fastq files
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2024-12-18 |
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bioconductor-snpstats
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public |
SnpMatrix and XSnpMatrix classes and methods
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2024-12-18 |
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bioconductor-fmcsr
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public |
Mismatch Tolerant Maximum Common Substructure Searching
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2024-12-18 |
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bioconductor-hem
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public |
Heterogeneous error model for identification of differentially expressed genes under multiple conditions
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2024-12-18 |
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bioconductor-mulcom
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public |
Calculates Mulcom test
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2024-12-18 |
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bioconductor-eir
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public |
Accelerated similarity searching of small molecules
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2024-12-18 |
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bioconductor-cancerclass
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public |
Development and validation of diagnostic tests from high-dimensional molecular data
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2024-12-18 |
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bioconductor-discordant
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public |
The Discordant Method: A Novel Approach for Differential Correlation
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2024-12-18 |
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bioconductor-nanostringdiff
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public |
Differential Expression Analysis of NanoString nCounter Data
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2024-12-18 |
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bioconductor-flowcatchr
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public |
Tools to analyze in vivo microscopy imaging data focused on tracking flowing blood cells
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2024-12-18 |
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bioconductor-yeastexpdata
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public |
Yeast Experimental Data
|
2024-12-18 |
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bioconductor-phenstat
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public |
Statistical analysis of phenotypic data
|
2024-12-18 |
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bioconductor-seqc
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public |
RNA-seq data generated from SEQC (MAQC-III) study
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2024-12-18 |
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bioconductor-prodata
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public |
SELDI-TOF data of Breast cancer samples
|
2024-12-18 |
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bioconductor-hopach
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public |
Hierarchical Ordered Partitioning and Collapsing Hybrid (HOPACH)
|
2024-12-18 |
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bioconductor-snagee
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public |
Signal-to-Noise applied to Gene Expression Experiments
|
2024-12-18 |
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bioconductor-rcellminerdata
|
public |
rcellminerData: Molecular Profiles and Drug Response for the NCI-60 Cell Lines
|
2024-12-18 |
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bioconductor-colonca
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public |
exprSet for Alon et al. (1999) colon cancer data
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2024-12-18 |
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bioconductor-mfa
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public |
Bayesian hierarchical mixture of factor analyzers for modelling genomic bifurcations
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2024-12-18 |
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bioconductor-curatedovariandata
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public |
Clinically Annotated Data for the Ovarian Cancer Transcriptome
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2024-12-18 |
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bioconductor-bioassayr
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public |
Cross-target analysis of small molecule bioactivity
|
2024-12-18 |
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bioconductor-dlbcl
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public |
Diffuse large B-cell lymphoma expression data
|
2024-12-18 |
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bioconductor-qcmetrics
|
public |
A Framework for Quality Control
|
2024-12-18 |
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bioconductor-lmdme
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public |
Linear Model decomposition for Designed Multivariate Experiments
|
2024-12-18 |
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bioconductor-multiscan
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public |
R package for combining multiple scans
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2024-12-18 |
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bioconductor-golubesets
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public |
exprSets for golub leukemia data
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2024-12-18 |
