| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-bsgenome.mmusculus.ucsc.mm10 | public | Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6) | 2025-04-22 |
| r-argparser | public | No Summary | 2025-04-22 |
| fastaindex | public | No Summary | 2025-04-22 |
| extract-sv-reads | public | Tool for extracting splitter or discordant reads from a BAM or CRAM file. | 2025-04-22 |
| perl-class-load-xs | public | XS implementation of parts of Class::Load | 2025-04-22 |
| perl-class-load | public | A working (require "Class::Name") and more | 2025-04-22 |
| perl-package-stash | public | routines for manipulating stashes | 2025-04-22 |
| perl-xsloader | public | Dynamically load C libraries into Perl code | 2025-04-22 |
| nucleoatac | public | Python package for calling nucleosomes using ATAC-Seq data. Also includes general scripts for working with paired-end ATAC-Seq data (or potentially other paired-end data). | 2025-04-22 |
| r-gprofiler | public | No Summary | 2025-04-22 |
| abyss-k128 | public | Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler | 2025-04-22 |
| ecmwfapi | public | No Summary | 2025-04-22 |
| dr-disco | public | Dr. Disco: fusion gene and genomic breakpoint detection in random hexamer RNA-seq data | 2025-04-22 |
| primerprospector | public | No Summary | 2025-04-22 |
| nextgenmap | public | NextGenMap is a flexible highly sensitive short read mapping tool that handles much higher mismatch rates than comparable algorithms while still outperforming them in terms of runtime. | 2025-04-22 |
| pacbio_falcon | public | No Summary | 2025-04-22 |
| emmix | public | No Summary | 2025-04-22 |
| fuma | public | FuMa: reporting overlap in RNA-seq detected fusion genes | 2025-04-22 |
| bioconductor-cardinal | public | A mass spectrometry imaging toolbox for statistical analysis | 2025-04-22 |
| bioconductor-customprodb | public | Generate customized protein database from NGS data, with a focus on RNA-Seq data, for proteomics search | 2025-04-22 |
| csvtk | public | A cross-platform, efficient, practical CSV/TSV toolkit | 2025-04-22 |
| vnl | public | No Summary | 2025-04-22 |
| gtf_to_genes | public | No Summary | 2025-04-22 |
| dcmtk | public | DCMTK is a collection of libraries and applications implementing large parts the DICOM standard | 2025-04-22 |
| bioconductor-pchicdata | public | Promoter Capture Hi-C data | 2025-04-22 |
